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Name : Clopa_3928 (Clopa_3928) Accession : YP_007942354.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : glycosidase Function : - COG functional category : - COG ID : - EC number : - Position : 3952831 - 3954516 bp Length : 1686 bp Strand : - Note : PFAM: Alpha amylase, catalytic domain DNA sequence : ATGAATAAAACATGGTGGAAAGAAGGAGTAGTCTATCAAATATATCCAAGGAGTTTTAAGGATTCCAATGGGGATGGAAT AGGAGATTTAAGTGGAATTATAGAAAAGCTTGATTATTTAAAAAATTTAGGAGTCAATATTGTATGGCTATGTCCAATTT ATAGATCGCCAAATGATGATAATGGTTATGATATTAGTGATTACAGAAAAATAATGACTGAATTTGGAACAGAAGAGGAT TTTAAAGAACTGCTTAGGGAAATGCACTCAAGAGGTCTTAAATTAATAATGGATTTAGTAGTAAATCATACTTCAGATGA ACATCATTGGTTTGCAGAGAGCAGAAAATCCAAAGACAATAAATATAGAGATTATTATATATGGAAAGATGGCAAGGAAG GCAATCCACCAAATAACTGGGGCTCATTTTTTAGCGGATCTTCTTGGAAATATGATGAGACTACAGAACAATATTATCTT CACCTATTCTCCACAAAGCAGCCAGATTTAAACTGGGAAAATAAAAAAGTTCGTAATGAAGTTTATGATATGATGAAATT TTGGCTTGATCAAGGTATAGATGGATTCAGAATGGATGTTATAAACTTAATTTCAAAGGTACCAAGTCTGCCTGATGGTG AGAAAGTAAATGGAGCTTTGTATGGAGATGTATTTCCCTTCACTGCTAATGGACCAAGAGTACATGAATATTTGCAGGAA ATGAATAAAGAGGTATTAAGTAATTATGATATTATGACTGTAGGTGAAACTCCTGGAGTAAATCCTGAAATTGCACAGCT TTATGTGAATAACGATAGGAATGAATTAAATATGTTATTTCAATTTGAACTTATGGATATAGATTCTGGAATCAAAGGCA AGTGGGATATTGTGCCTTGGAAATTAACTACCTTTAAAAATATAATGTATAAATGGTATGACGGCTTAAAAGATAAAGGT TGGAATTCTCTGTTTTTAAATAATCACGATCAGCCAAGATTGGTATCTCGCTTTGGTAATGACAAAGAATATAGAGTAGA ATCCGCAAAAATGCTGGCTACATTTCTGCATACATGGCAGGGAACTCCCTATGTATATCAAGGTGAAGAAATAGGAATGA CAAATGTAGAATTTAAAAATATAGAAGATTATAGAGACATTGAAATTATTAATATGTTTAAAGAAAAATCAGAACAGGGA ATAGATAAAGACGTATTGATGAAGGCAATATACGCAAAGGGCAGAGATAATGCCAGAACTCCTATGCAATGGGACTCTTC TGATAATTCAGGCTTTACAGAGGGAAACCCTTGGATTGCTGTAAATCCGAATTATAAAGAAATAAATGTAGAGCAGGCAT TGGAAGATAAAAATTCAGTATTCTACTATTATCAGAAACTAATTAAGCTCAGAAAAGAAAACAAAATAATAGTGTATGGT GACTTAGAACTCATAGATAAAGAAAACGAGAATATATTTGCATATACTAGAAGCTATAATGGTGAAAAATTGTTAGTTGT ATTAAATTTTTATGGAGAAAAAGTACAATTTAAGGTTGATGAAAAGCTTGAGAATAAGGAAGTTAAATTGTTAATAAGCA ATTATCAGGTGGAGGATGACAATCTGAATAATATAAAACTAAGACCTTATGAAGCAAGAGTATACAAAATTAATTTTAAT TTGTAA Protein sequence : MNKTWWKEGVVYQIYPRSFKDSNGDGIGDLSGIIEKLDYLKNLGVNIVWLCPIYRSPNDDNGYDISDYRKIMTEFGTEED FKELLREMHSRGLKLIMDLVVNHTSDEHHWFAESRKSKDNKYRDYYIWKDGKEGNPPNNWGSFFSGSSWKYDETTEQYYL HLFSTKQPDLNWENKKVRNEVYDMMKFWLDQGIDGFRMDVINLISKVPSLPDGEKVNGALYGDVFPFTANGPRVHEYLQE MNKEVLSNYDIMTVGETPGVNPEIAQLYVNNDRNELNMLFQFELMDIDSGIKGKWDIVPWKLTTFKNIMYKWYDGLKDKG WNSLFLNNHDQPRLVSRFGNDKEYRVESAKMLATFLHTWQGTPYVYQGEEIGMTNVEFKNIEDYRDIEIINMFKEKSEQG IDKDVLMKAIYAKGRDNARTPMQWDSSDNSGFTEGNPWIAVNPNYKEINVEQALEDKNSVFYYYQKLIKLRKENKIIVYG DLELIDKENENIFAYTRSYNGEKLLVVLNFYGEKVQFKVDEKLENKEVKLLISNYQVEDDNLNNIKLRPYEARVYKINFN L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-160 | 59 |
