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Name : Clopa_3921 (Clopa_3921) Accession : YP_007942347.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : glycosidase Function : - COG functional category : - COG ID : - EC number : - Position : 3945076 - 3946755 bp Length : 1680 bp Strand : - Note : PFAM: Alpha amylase, catalytic domain DNA sequence : ATGAGTAATTGGTGGAAAAAATCAGTGGTTTATCAAATATATCCAAGAAGCTTTAAGGATTCAAATGGTGATGGATATGG TGATTTAAATGGTATAATAGAAAAATTGGATTATTTAAAGAATCTGGGAATTGATGTTCTATGGATCAGCCCTGTTTATG AGTCTCCTCAAGATGATAACGGTTATGATATCAGCGACTATAGAAAAATATACGAAAAATTTGGAACTAATGCTGATATG GAAAAATTAATTGAGGAAGCACATGGTAGAGGTATTAAAATAGTAATGGATTTAGTTGCTAACCATACCTCTGATGAACA TTATTGGTTTGAAGAAAGTAAAAAATCTAAGGATAATCCATATAGTGATTATTATTTCTGGCTTGATCCTAAAACGGATG GCAGTGAACCAAATAATTGGGGATCAAGTTTCTGTGGCTCAGCTTGGGAATATTCAAAGGAAAGAAATCAATATTATCTA CATTATTATACAAAGAAGCAACCGGATTTAAATTGGGAAAACCCAAAAGTTCGTCAGGAAGTTTATGATTTAATGAAATT TTGGATGGATAAAGGAGTAGATGGATGGCGTATGGATGTAATTGCATCTATATCAAAATATACTGATTTCCCGGATTATC CTGAAAAACCTGGACAAAAATATATTACAGGTTTTATGCATGCTAACGGACCAAGACTTCACGAATATCTGCAGGAAATG AATAAAGAAGTATTATCAAAATATGACTGCATGACTGTTGGAGAAGCACCTGGATCCGATTCAGATATTGCTAGATTATT TGTAGATCCAGAAAGAAAAGAATTAAATATGATCATTACCTTTGAACATATGAATCTTGATAGAATTCCAAGTTCTCCAA ATAGAAAATGGGCATTGAGAGATTTTGATTTAGTAGAATTAAAACGTGTTTTGTCTAATTGGCAAGTAAAATTACTTGAT CATGGATGGAATGCTCTATATTTTGAAAATCATGATCAGCCTAGAATTATTTCACGCTGGGGAAATGATACAAATTATCG TAAAGAATGTGCAAAAGCCTTCGCCACTATACTTCATGGTATGCAGGGAACACCTTATATTTATCAAGGAGAAGAAATAG GTATGGTAAATGCTCATTACAAGCTTGAAGAATATGATGATGTGGAAATTCATAATGCATATAGAGAATTAGTACAGAAA AATAAATCTATTTCAGAAGAAGATTTTATGGCCGCAGTATGGAAAAAAAGCCGTGATAATGCCAGAACTCCAGTGCAATG GAACAACTCTGAAAATGCAGGGTTTACAACAGGTAAACCTTGGATTAAGGTAAATCCACGTTATTCTGAAATTAACGTAG CGGAGGCATTGAAAGATGAAAATTCTATTTTCTATTATTATCAGAAGTTAATTAAGTTACGTCATGAAGAACAAATTCTT ACAGATGGTACATTTAAGCTTTATTTGGAAGATCATCCAAGTTTATATGTATATGAAAGAGAATTTAAAGGTGAAAAATG GCTTATTGCAGCTAATTTTTCAGAGGAAGAGACGGCTATAGATGATCTTAAACCTTATTTTTATGAAAAGTGGGAGAAAG TTATCAGTAATTATCAGGAAATACGGGTGAATACCCCTTTAAGACCTTATGAGGCGTTTATTGTTAGAAGTGTTAAATAG Protein sequence : MSNWWKKSVVYQIYPRSFKDSNGDGYGDLNGIIEKLDYLKNLGIDVLWISPVYESPQDDNGYDISDYRKIYEKFGTNADM EKLIEEAHGRGIKIVMDLVANHTSDEHYWFEESKKSKDNPYSDYYFWLDPKTDGSEPNNWGSSFCGSAWEYSKERNQYYL HYYTKKQPDLNWENPKVRQEVYDLMKFWMDKGVDGWRMDVIASISKYTDFPDYPEKPGQKYITGFMHANGPRLHEYLQEM NKEVLSKYDCMTVGEAPGSDSDIARLFVDPERKELNMIITFEHMNLDRIPSSPNRKWALRDFDLVELKRVLSNWQVKLLD HGWNALYFENHDQPRIISRWGNDTNYRKECAKAFATILHGMQGTPYIYQGEEIGMVNAHYKLEEYDDVEIHNAYRELVQK NKSISEEDFMAAVWKKSRDNARTPVQWNNSENAGFTTGKPWIKVNPRYSEINVAEALKDENSIFYYYQKLIKLRHEEQIL TDGTFKLYLEDHPSLYVYEREFKGEKWLIAANFSEEETAIDDLKPYFYEKWEKVISNYQEIRVNTPLRPYEAFIVRSVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-131 | 53 |
