Gene Information

Name : Clopa_3573 (Clopa_3573)
Accession : YP_007942032.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3564279 - 3565709 bp
Length : 1431 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence : 
ATGCAAAAGACTAAAATGATCTTTACCGTAGGACCAGCAAGTGAAAATGAAGAGGTTGTATCTAAACTAATTGAAGCAGG
AATGAGTGCATCAAGACACAATTTCTCACATGGTGACCACAATGAACATAAGACTAGAATGGATCTTATCAAAAAACTAA
GAGAAAAATACAATAAGCCAATAGCAATAATACTTGATACAAAAGGTCCAGAAATAAGAACACATAATTTTGATGGTGGA
AAACTTGAACTTCAAAAGGGAGCTAAATTCACAGTAATTTGTGGAGAAGAAGTTCTTGGAGATGCAACAAAATGCTCCAT
TACTTACACAGATTTATATAAAGATGTTGTTGCAGGAAATACTATATTAATTGATGATGGTCTTGTTGGATTAACTGTTG
AAGCAGTTGAAGGTACAGATATTCACTGTACAGTAGCTAATACAGGACTTGTAGGAAGTCACAAAGGAGTTAATGTTCCT
AATGTTTCAATAAAACTTCCAGCTATGACAGATAAAGATAAATCCGATCTTATATTCGGCTGTGAACAAGAAGTTGATGC
AGTAGCAGCTTCCTTTATAAGAAAAGCAGATGATGTAATTGCAATAAGAAAAGTGCTTCAAGAAAATGGTGGAAGCCATA
TTCAGATTTTCTCAAAAATAGAAAATCAAGAAGGTGTAGATAACATAGATGAAATTATCGAAGTTTCTGATGGTATAATG
GTAGCAAGAGGAGACATGGGAGTTGAAATTCCTATAGAATTAGTTCCACTAACTCAAAAAATGATTATTGGAAAATGTAA
TATATTAGGAAAACCAGTTATCACTGCAACTCAAATGCTTGATTCAATGATAAGAAACCCAAGACCTACAAGAGCAGAAG
CATCAGATATAGCAAATGCCATATTTGATGGTACAGATGCTATAATGTTAAGTGGTGAAAGTGCTAATGGATCATATCCA
GTAGAAGCTGCACAAACTATGGCTAGAATTGCTCAAGCTGCAGAAAAACAACTAAACTACAAAGAAGTACTTGCAAAGAG
AAAACAAAATTCTGTTAAAAATATAGCAAATGCAATAAGTCTTGCTGCTAGCGAAACAGCTGCAGAACTTAATGCAGCTG
CAATAGTTACTGCTACTCAAACTGGAAATACAGCAAGAATGGTTGCAAAATATAGATCAGAAGCTCCTGTAATTGCAGTA
ACTCCACAGGAAAAAGTTGCTAGATCTCTTGCATTAAGCTGGGGAGTATCTCCAATAGTAGCTGAAAAAGTTGAATCAAC
AGATGAATTAATAGTTAAATCTGTAGAAGCAGCTAAAGAATATAACTATGTTAAAGATGGAGATTTAGTTGTAGTGGCAG
CAGGTGTACCTGTTCAAAATACAGGAAGCACAAATCTTTTAAAAGTTCATGTAGTTGGATCTGAAAAATAA

Protein sequence : 
MQKTKMIFTVGPASENEEVVSKLIEAGMSASRHNFSHGDHNEHKTRMDLIKKLREKYNKPIAIILDTKGPEIRTHNFDGG
KLELQKGAKFTVICGEEVLGDATKCSITYTDLYKDVVAGNTILIDDGLVGLTVEAVEGTDIHCTVANTGLVGSHKGVNVP
NVSIKLPAMTDKDKSDLIFGCEQEVDAVAASFIRKADDVIAIRKVLQENGGSHIQIFSKIENQEGVDNIDEIIEVSDGIM
VARGDMGVEIPIELVPLTQKMIIGKCNILGKPVITATQMLDSMIRNPRPTRAEASDIANAIFDGTDAIMLSGESANGSYP
VEAAQTMARIAQAAEKQLNYKEVLAKRKQNSVKNIANAISLAASETAAELNAAAIVTATQTGNTARMVAKYRSEAPVIAV
TPQEKVARSLALSWGVSPIVAEKVESTDELIVKSVEAAKEYNYVKDGDLVVVAAGVPVQNTGSTNLLKVHVVGSEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-93 51
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-94 51
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-94 51
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-93 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_3573 YP_007942032.1 pyruvate kinase VFG0479 Protein 3e-94 51