Gene Information

Name : Clopa_3486 (Clopa_3486)
Accession : YP_007941953.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : ABC-type Fe3+-siderophore transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3477126 - 3478190 bp
Length : 1065 bp
Strand : -
Note : PFAM: FecCD transport family

DNA sequence :
ATGACGAATGAAACTACACAAGCAAAAAAAACTTTTAATACTCGTGAACTCTACAACAAAATAATTAGAAAAAGAATATA
TTTTATAATATGTTCATTAATGATATTATTATCATTTTTTACTATTGATATAATGACAGGGGCTTCCTTACTTTCTATTA
AAGAGGTATTATACACTATATTTTTTTCATCCTCCAGTGATTATCAAACTTATGTAATAGTATGGATAATGAGAATGCCT
GTTGCTGTAATGGCAGTAATTGTAGGAGCATCTCTTTCAGTTGCAGGTGCTGAAATGCAGACTATTTTAGATAATCCTAT
GGCAACTCCATATACTTTGGGTATATCGTCTGCAGCTTCTTTTGGTGCTTATTTAGCGATCGTTATTGGAAAGGGGATAA
TTCCTGTACGTGAGGATTTAATTATTCCAATTAATGCATTTGTATTCTCACTAGCATTATCTTTACTCATTTATTTTATA
GCAAGGGTAAAAAAAGGAACTTCTGAAACGATTATTCTTGCTGGAATTTCATTTTCATTTTTATTCAGTTCTCTTGCATC
AATTTTAAATTATATTGCAACTGAAGAAAGCCGCCAAAAAATAATTATGTGGTCTTATGGAAGTCTATCAGCATCAAAGT
GGTCTACTGTTATTATAGTATTTATAGTATTTATAGTCACTGTGCCATTATTATTAGTAGATTCTTGGAAAATAACTTCT
TTAAAATTGGGAGATAGTAAAGCAAAATCTTTAGGTGTAAATGTAGAAAGAATAAGGCTTAAAGTGTTAGTTATTGTGTC
TCTTATAGCAGCAACCTCTGTTTGTTTTGTTGGAACTATAGGCTTCATTGGTTTAGCAGGCCCCCATATTGCAAGATCGT
TTGTAGGAGAAGATCACAGATATTTTATACCGTGTTCTGCTTTAATAGGAGCTTGTATACTTTCTATTTCTTCTGTACTT
AGTAAAGTATTGGTACCAGGTGCAATTATAGATGTTGGATTGATTACAGCTATTATAGGAATGCCATTTTTATTATCAAT
TGTACTAAGGAGGAAGAACTATTAA

Protein sequence :
MTNETTQAKKTFNTRELYNKIIRKRIYFIICSLMILLSFFTIDIMTGASLLSIKEVLYTIFFSSSSDYQTYVIVWIMRMP
VAVMAVIVGASLSVAGAEMQTILDNPMATPYTLGISSAASFGAYLAIVIGKGIIPVREDLIIPINAFVFSLALSLLIYFI
ARVKKGTSETIILAGISFSFLFSSLASILNYIATEESRQKIIMWSYGSLSASKWSTVIIVFIVFIVTVPLLLVDSWKITS
LKLGDSKAKSLGVNVERIRLKVLVIVSLIAATSVCFVGTIGFIGLAGPHIARSFVGEDHRYFIPCSALIGACILSISSVL
SKVLVPGAIIDVGLITAIIGMPFLLSIVLRRKNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67369.1 putative permease Not tested PAI II CFT073 Protein 1e-41 42
irp6B NP_938505.1 membrane protein permease Irp6B Not tested Not named Protein 1e-37 41