Gene Information

Name : Clopa_3255 (Clopa_3255)
Accession : YP_007941738.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3246528 - 3247946 bp
Length : 1419 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGCAAAAAACAAAGATGATTTTTACTATTGGCCCAGCCAGTGACACAGAAGAAACTCTAGAAAAACTTATAAATATTGG
TATGAATGTAGCAAGACTTAACTTTTCTCATGGCACTCATGAGAGTCATAAAGAAAAAATGGATATTATCAAAAGACTTA
GAGAGAAACTTAATAAACCCGTTGCAATTATGCTTGATATTAAAGGCCCTAAAATAAGAACTCATAATTTTGAAAATGAT
AAAGTGTTAATAGAAAAAGATAATAAGTTCGTATTCATATGTGGGAAAGAACTTCTTGGAAATAAAGAGAGATGCTCTGT
TTCCTATGACCAGCTATATAAAGATGTGAAAGCTGGGGGAATGTTACTTGTAGACGATGGTCTGCTGGAATTAAGAATAG
ATTCTGTTGAAGGTAATGAAATTCACTGCACAGCTCTTAATACAGGTTACATTGGAAGCCACAAAGGTATAAATGTGCCA
AATGTATCCATAGGTCTCCCTGCTGTTACTGAAAAGGACAAATTTGATCTAATATTTGGTTGTGGGCAGGAAGTAGATAT
AGTAGCTGCCTCCTTCATAAGAAAAGCTGAAGATGTGTTAGATGTGAGAAGAATACTTAATGAAAATGGTGGAGAAAAAA
TTCAAATAATACCTAAAATAGAAACCCAAGAAGGTGTAGATAATATTGATGCAATAATTAAAGCTGCAGATGGAATTATG
ATTGCAAGGGGAGATATGGGAGTTGAAATTCCACTTCAAAGAGTACCTATTATTCAAAAAATGATAATACAAAAATGTAA
TAAAGCTGGCAAACCTGTAATAACTGCAACTCAAATGCTGGATTCAATGATAAGAAATCCAAGACCAACCAGAGCAGAGG
CCTCAGATATAGCAAATGCCATATTTGATGGAACAGATGCCATAATGTTAAGTGGTGAAAGTGCAAGTGGTGATTATCCA
CTAGAGGCTGCTGGCACTATGTCTAACATAGCCAAGGAAGCTGAAGCAAATATAGATTACTCTGACGCCTTAAATAGGAG
AAAGGAAAGTAGTATAAGCAATGTATCAAATGCTATAAGCCTAGCTGCCTGTAATACTGCCCAAGAACTTAAGGTTGCTG
CAATCATAACCTCAACTCAAACTGGCCATACCGCTAGAATGGTATCTAAATATAGACCTGAATGTCCAATCGTTGCAGTT
ACACCAAGTGAAAAAGTGGCTAGAGCTCTTTCCTTAAATTTCGGAGTTAAAGCAATAGTATCCAACAAATTAATCTCTAC
AGATGAACTAATTGAAGATGCAGTAAAAAAATCTCTAGAGTCTAATTATATAAAAAAAGGTGATTTGGTTATAATTGCTG
CCGGAATACCTGCTGGTACTACAGGTACAACAAATATGATGAAAATCCAGCAAATTTAA

Protein sequence :
MQKTKMIFTIGPASDTEETLEKLINIGMNVARLNFSHGTHESHKEKMDIIKRLREKLNKPVAIMLDIKGPKIRTHNFEND
KVLIEKDNKFVFICGKELLGNKERCSVSYDQLYKDVKAGGMLLVDDGLLELRIDSVEGNEIHCTALNTGYIGSHKGINVP
NVSIGLPAVTEKDKFDLIFGCGQEVDIVAASFIRKAEDVLDVRRILNENGGEKIQIIPKIETQEGVDNIDAIIKAADGIM
IARGDMGVEIPLQRVPIIQKMIIQKCNKAGKPVITATQMLDSMIRNPRPTRAEASDIANAIFDGTDAIMLSGESASGDYP
LEAAGTMSNIAKEAEANIDYSDALNRRKESSISNVSNAISLAACNTAQELKVAAIITSTQTGHTARMVSKYRPECPIVAV
TPSEKVARALSLNFGVKAIVSNKLISTDELIEDAVKKSLESNYIKKGDLVIIAAGIPAGTTGTTNMMKIQQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-97 49
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-97 49
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-98 49
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-96 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_3255 YP_007941738.1 pyruvate kinase VFG0479 Protein 6e-98 49