Gene Information

Name : Clopa_3215 (Clopa_3215)
Accession : YP_007941702.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : single stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3202842 - 3203300 bp
Length : 459 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGAATAAAATACAACTTGTGGGCCACTTAGTAAAGGATCCTGATCTTAAATTTATACAAGGGTCCGGAACTCCTGTAGT
GAAGTTCACTTTGGTAATTAACAGACCTAGATTTGACAAAAACAAGCCACAGGAAGCAGACTTCTTTAATTGTACAATGT
TTGGGAAAAGAGCGGAAACAATAGCTAATTATGTTTTTAAGGGACATTTATTTGGCCTTAGTGGAAGAGTGCAAATAAAT
AAATATGCAGCTCAAGATGGTACTAATAGATGGAGTACTGATGTAATGGTTGAAGACTTTGATTTATTACAACCTAAGGG
AGTGGATAATAATTCCAAAAATCAAAGTAGCAAGGTTCTTGAACCTGTGAAAAATAATGATGAATATTTAAAAGCGGATA
TAACGCCCATAGATGATGGTGATATACCTTTTAAGATAGCAGTTAGTCAAGCTGCTTAA

Protein sequence :
MNKIQLVGHLVKDPDLKFIQGSGTPVVKFTLVINRPRFDKNKPQEADFFNCTMFGKRAETIANYVFKGHLFGLSGRVQIN
KYAAQDGTNRWSTDVMVEDFDLLQPKGVDNNSKNQSSKVLEPVKNNDEYLKADITPIDDGDIPFKIAVSQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 4e-22 47
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 3e-22 47