Gene Information

Name : Clopa_2999 (Clopa_2999)
Accession : YP_007941506.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : pyridoxal 5''-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2979918 - 2980787 bp
Length : 870 bp
Strand : -
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGGGTAAATATGAAATAAATAAAAATTTAGCTCAAATGCTAAAGGGTGGAGTAATAATGGATGTTGTAAATCCAGAACA
GGCAGTAATAGCAGAGAAAGCAGGTGCTTGTGCAGTTATGGCACTGGAAAGAGTACCTTCTGATATTAGAAAAGAGGGTG
GAGTAGCTAGAATGTCTGACCCAAAGATGATAAAGGGAATACAGGAAGCTGTATCTATTCCAGTAATGGCAAAGGTAAGA
ATAGGGCATTTTGTGGAAGCTCAAATATTGCAGCAATTATCAATAGATTTTATTGATGAAAGTGAAGTTCTTACTCCTGC
AGATGAAGCTTATCATATAAATAAATGGGATTTCAATGTTCCCTATGTATGCGGTGCAAGAAATTTAGGAGAAGCCCTTA
GAAGAATTGGTGAAGGCGCTGCCATGATAAGGACAAAGGGAGAAGCTGGCACAGGAAATGTAGTTGAGGCAGTAACGCAC
ATGAGAACTATGATGGATGATATTAGAAAAGTAAAGAATGCGCCAAAAGAAGAACTTATGTCTATTGCCAGGGATTTTGC
AGCACCTTATGATTTAGTAGAATATGTGTGGGAAAATGGAAAGCTTCCAGTAGTCAATTTTGCGGCAGGTGGAATTGCTA
CCCCAGCGGATGCAGCACTTATGATGCAATTAGGTGCAGAAGGTGTATTTGTTGGATCTGGAATATTCAAGTCTGAAAAT
CCGCAGGAAAGAGCAAAAGCTATTGTTTTAGCAACCACTTATTACAATGATCCTAAGGTACTTTCAGAAGTATCAGAGGG
ACTTGGAGAAGCAATGCATGGTCTTGAATTAAATGAAATTAAAGATAGGTATGCAGAAAGAGGCTGGTAA

Protein sequence :
MGKYEINKNLAQMLKGGVIMDVVNPEQAVIAEKAGACAVMALERVPSDIRKEGGVARMSDPKMIKGIQEAVSIPVMAKVR
IGHFVEAQILQQLSIDFIDESEVLTPADEAYHINKWDFNVPYVCGARNLGEALRRIGEGAAMIRTKGEAGTGNVVEAVTH
MRTMMDDIRKVKNAPKEELMSIARDFAAPYDLVEYVWENGKLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKSEN
PQERAKAIVLATTYYNDPKVLSEVSEGLGEAMHGLELNEIKDRYAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-84 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-84 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-83 68