Gene Information

Name : Clopa_2373 (Clopa_2373)
Accession : YP_007940913.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : ABC-type spermidine/putrescine transport system, permease component I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2397740 - 2398651 bp
Length : 912 bp
Strand : +
Note : PFAM: Binding-protein-dependent transport system inner membrane component

DNA sequence :
TTGGGAATCTGGAGACATGACAATGGTTGCAGATGGGTAGGTGAGAAGAATATGAAAGAGAAAAAAACAGGTATATCAAA
ATTAGTTACAACAATACCTATTTCACTATGGATGTTAATTTTTGTAGCCATACCACTTTTATATATAATATTCATAAGTT
TTATGCAAAGGGGAACAGATGGAGGAGTTATTTATACTCCAACTATTGAGAACTATACGAGAATGGGAAGTCCATTATAT
TTTAAAGTATTTATGGATTCATTAATTATAGCATTTATTACTACGGTGTTAACTTTGATATTAGGGTATCCTTTTGCATA
TTTTTCTTCCAAAGTACCAAAGAAGTTTAGCATTATAGTGCTAATAATTATAATTGTACCATTTTGGACTAATTCTCTCA
TAAGGACTTATGGTTGGATTATACTTTTAAGATCTCAGGGAATTATAAATCATTTTCTCATGTTAGCAGGAATAATTAAA
GAGCCATTAGAAATGTTATATACCTATGGTGCAGTACTTATAGGTATGGTATACACTATGTTTCCATTTATGGTGCTTCC
ACTATACAATTCCATAGAAAAATTAGATAGAAGTTATATTGAAGCGGCAAAAGATTTAGGTGCCAGCAGATTAAGAACCT
TTTGGACAATAACAATTCCACTAACTATGTCAGGTATAATAGCTGGATGTATACTTGTATTTATACCATCTGTAGGATTA
TTTTTTATACCAGATTTAATGGGAGGAAGCAAGGTAATGCTAATAGGCAATTTAATAAGAAATCAGTTCCTGGTGTCAAG
AGATTGGCCTTTTGGTGCAGCACTTTCTATTGCCATGATATTGGTTTCACTTTTATTAATGGGTATATATGTAAAAATAG
CGGGTAAAAAGGTTGATATGGAGGTATTTTAA

Protein sequence :
MGIWRHDNGCRWVGEKNMKEKKTGISKLVTTIPISLWMLIFVAIPLLYIIFISFMQRGTDGGVIYTPTIENYTRMGSPLY
FKVFMDSLIIAFITTVLTLILGYPFAYFSSKVPKKFSIIVLIIIIVPFWTNSLIRTYGWIILLRSQGIINHFLMLAGIIK
EPLEMLYTYGAVLIGMVYTMFPFMVLPLYNSIEKLDRSYIEAAKDLGASRLRTFWTITIPLTMSGIIAGCILVFIPSVGL
FFIPDLMGGSKVMLIGNLIRNQFLVSRDWPFGAALSIAMILVSLLLMGIYVKIAGKKVDMEVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 1e-57 54