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Name : Clopa_2265 (Clopa_2265) Accession : YP_007940812.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : site-specific recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 2290653 - 2291789 bp Length : 1137 bp Strand : + Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family DNA sequence : GTGAGGGTACAGGAAGTAATATTAGATAGGAACAAAAAAAGGTATATGCTACTCGATAATGAAAAATTACCAATAGTACC AGTAGTGAAATATTTAAAATATCTCGATAATACAGGGAAAAGCAGTAATACTCAGAAGACCTACTGTTATAGTTTAAAGC TATATTTTGAGTTTTTAAAAGAAATGCAAAAAGACTATCGGCAAGTTGATATAAATGCGTTATCCGATTTTGTAGGTTGG TTACAAAACCCTTACGAAAGTTGTAAAGTAACAAGTTTAAAGCCAATTAAATCGAAGAGGACAGAAAAAACAGTAAATCT TACTGTAACAGTAGTAACTAATTTTTATGATTATTTGTTTAGGAGTGAAGAAATTGAAAATGATATACTTCAAAAACTAA TGGGTCAAATATCTACTGGCAGACATAGGGTATATAAAGATTTTTTATATCATGTAAATAAGGATAAACCTATAAATAAA AATATACTAAAAATCAAAGAACCGAGAAAAAAGCTAAATGTGCTTACTAAAGAAGAAGTTGAAAAAATCTATAAAGCAAC TACTAATATAAGAGATAAATTTTTAATAGAATTACTCTTTGAAACTGGATTAAGGATTGGTGAGGCTTTATCTTTATTTA TAGAGGACTTTATTTGTGACTATAATAAAGGGCATAAAATTAGATTAGTAGATAGAGGAGAACTTTCTAATGGAGCAAGA CTAAAGACAGGAGAAAGAGAAATATATATATCACAAGAGTTAATGGATTTATTTGATGATTATATGTATGAAGTTTTGGA TGAATTAGAGATTGATACTAACTTTGTATTTGTTAAATTAAAGGGGGAAAATCAAGGGGGGCCTATGAGTTACATTGAGG TAAGCGCTTTATTTAAAAGGCTTAAAGAAAAAACGGAAATAGACGTACATCCTCATCTTCTAAGACATACCCATGCTACA ATTTACTACAGGCAAACTAAAGATATTAAACAATTGCAGGAGAGATTAGGGCATTCCCAAATACAAACAACAACGAATAT GTATTTACACCCTTCTGATGATGATATAAGAGCAAGTTGGGAAAAAGCACAATCAGCTTTTAAAATAACAAATAATGGAG AAAAGAAGGATACTTAA Protein sequence : MRVQEVILDRNKKRYMLLDNEKLPIVPVVKYLKYLDNTGKSSNTQKTYCYSLKLYFEFLKEMQKDYRQVDINALSDFVGW LQNPYESCKVTSLKPIKSKRTEKTVNLTVTVVTNFYDYLFRSEEIENDILQKLMGQISTGRHRVYKDFLYHVNKDKPINK NILKIKEPRKKLNVLTKEEVEKIYKATTNIRDKFLIELLFETGLRIGEALSLFIEDFICDYNKGHKIRLVDRGELSNGAR LKTGEREIYISQELMDLFDDYMYEVLDELEIDTNFVFVKLKGENQGGPMSYIEVSALFKRLKEKTEIDVHPHLLRHTHAT IYYRQTKDIKQLQERLGHSQIQTTTNMYLHPSDDDIRASWEKAQSAFKITNNGEKKDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | BAC53829.1 | transposase A(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 6e-52 | 41 |
| tnpA | BAC57491.1 | transposaseA | Not tested | Type-IIIinv SCCmec | Protein | 6e-52 | 41 |
| unnamed | BAA82201.1 | transposaseA | Not tested | Type-II SCCmec | Protein | 6e-52 | 41 |
| tnpA1 | YP_039526.1 | transposase A 1 | Not tested | Type-II SCCmec | Protein | 8e-52 | 41 |
| tnpA | NP_370580.1 | transposase A | Not tested | Type-II SCCmec | Protein | 8e-52 | 41 |
| tnpA | NP_373292.1 | transposase A for Tn554 | Not tested | Type-II SCCmec | Protein | 8e-52 | 41 |
| tnpA-3 | YP_190048.1 | transposase A | Not tested | Type-II SCCmec | Protein | 8e-52 | 41 |
| tnpA | BAB47667.1 | transposase A(Tn554) | Not tested | Type-III SCCmec | Protein | 6e-52 | 41 |
