Gene Information

Name : Clopa_2257 (Clopa_2257)
Accession : YP_007940804.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : DNA replication protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2278559 - 2279314 bp
Length : 756 bp
Strand : -
Note : PFAM: IstB-like ATP binding protein

DNA sequence :
ATGAAGGATGAAACTAATATAAACACTAATATAAAGCGCTTGCTAAAACAGTTTAGGCTTCCCGATATATATGATAGATA
TGACGAAGAAGTTAATTATGCCATAGAAAATAAAATTGGTTATAGAGAATTCTTGTACAAGCTTTTGGCGCTCGAAGAGC
AAGGAAAAATGGAACGTCTAAAAATGAGGAACATTAAAAATGCCTGTTTTGATGCATATAAAACAATCGAAGATTTTCAT
TTCAACTTTCCCAAACATATTAATCAAACGAAAGTTATTGATTTGGCTACTTTAAGTTTTATGGAAAAGAAAGAAAATGT
AGTTTTTATTGGGCCTCCCGGCCTTGGTAAAAGTCATTTATCCATTGCAATAGGTATTAAAGCCTGTGAGAAAGGTAAAT
CTGTTCGTTTTGTCAATGCAATTGAACTAGTTGATGAATTATATAATGCAATAGATTCTGGTAATCTAAAACAAAAATTT
AAGAAATTATCAAAAATAGACTTACTTATAATAGATGATATTGGTTATTTAAAAATGGATAAAGAAAAAGAGAGTTTATT
TTTTCAGTTAATCCGCCAAAGATACGAAAAAAGCTCTCTAATAGTAACAACAAACTTACCGTTTGAAAGATGGGACGAGA
TATTCACTAGTGAATTAGCGGCTACTGCTGTACTAGATAGGCTTCTTCACCATTCCCACGTCATAAGTATAACAGGCGAT
AGCCATAGAGTAAATAGGTATTTACAGGAGGAATAA

Protein sequence :
MKDETNINTNIKRLLKQFRLPDIYDRYDEEVNYAIENKIGYREFLYKLLALEEQGKMERLKMRNIKNACFDAYKTIEDFH
FNFPKHINQTKVIDLATLSFMEKKENVVFIGPPGLGKSHLSIAIGIKACEKGKSVRFVNAIELVDELYNAIDSGNLKQKF
KKLSKIDLLIIDDIGYLKMDKEKESLFFQLIRQRYEKSSLIVTTNLPFERWDEIFTSELAATAVLDRLLHHSHVISITGD
SHRVNRYLQEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-31 45
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 5e-35 42
unnamed CAA21402.1 - Not tested HPI Protein 6e-35 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 5e-35 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 5e-35 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-35 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 5e-35 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 5e-35 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 6e-35 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 6e-35 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 6e-35 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-35 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_2257 YP_007940804.1 DNA replication protein VFG1460 Protein 8e-32 45
Clopa_2257 YP_007940804.1 DNA replication protein VFG1515 Protein 3e-35 42
Clopa_2257 YP_007940804.1 DNA replication protein VFG1627 Protein 3e-35 42
Clopa_2257 YP_007940804.1 DNA replication protein VFG1606 Protein 3e-35 42
Clopa_2257 YP_007940804.1 DNA replication protein VFG1663 Protein 6e-35 41