Gene Information

Name : Clopa_0217 (Clopa_0217)
Accession : YP_007938961.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 216391 - 217389 bp
Length : 999 bp
Strand : +
Note : PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase

DNA sequence :
TTGGTTAGTTTAAAGAATAGAAATTTTTTAACTTTAAGGGATTTTTCTACCGAGGAAATAAATTTTTTATTGGATCTAGC
AGAAGAATTAAAATCCACCAAAAAAGCGGGAACAGAAATACAAAGATTAAAGGGTAAAAATATAGCGTTGATATTTGAAA
AAGATTCTACTAGAACAAGATGTTCCTTTGAAGTAGGTGCTTATGATCAGGGAGCAAACGTTACTTATTTAGGGCCTACA
GGGACTCCAATAGGAAATAAAGAATCTATCAAGGATACTGCAAGAGTTTTAGGCAGAATGTTTGATGGAATTGAATATAG
AGGATTTGAACAAGAAAAGGTTGAAATATTGGCAAAGCATGCTAAAGTACCAGTTTGGAATGGACTTACAGACGATGATC
ATCCTACTCAGGTTTTGGCAGATCTTTTGACTATAAGAGAACATTTTGACAAGCCTTTAAATAAAGTCACTTTAGTGTAT
TGTGGTGATGGGAGAAATAATACTGCTAATGCATTAATGATAGGCGCTTGTAAGATGGGAATGGATTTTAGAATAGCTAC
TCCAAAAACACTTTTTCCTAAAGCTGAACTTATAGAAGAATGTACAAAAGTAGCAGAAGAAACTGGTGGGAAAATAACAA
TTACAGAAGATGTAGATAAGGCTGTTCTAGGAGCTGATGTTTTATATAGCGATATCTGGGTATCTATGGGTGAGGATGAG
GAAGTTTGGAAGAAACGATTGGAAATATTATATCCTTATCAAATAAATAAAGAATTATTAAAAAAGACTAATAATAATAA
TAATGTTAAGTTTATGCACTGTCTTCCTTCTTTTCATGATTTAAATACTATTGATTCAAAAGCAATACATGATAAATTTG
GAATAGATCCTTTCGAAGTAACGGATGAGGTTTTCGAAAGTGAAGCTTCCTTAGTTTTTGATGAGGCTGAAAATAGAATG
CACACGATAAAAGCCGTAATGGTTGCAACTCTGGCATAG

Protein sequence :
MVSLKNRNFLTLRDFSTEEINFLLDLAEELKSTKKAGTEIQRLKGKNIALIFEKDSTRTRCSFEVGAYDQGANVTYLGPT
GTPIGNKESIKDTARVLGRMFDGIEYRGFEQEKVEILAKHAKVPVWNGLTDDDHPTQVLADLLTIREHFDKPLNKVTLVY
CGDGRNNTANALMIGACKMGMDFRIATPKTLFPKAELIEECTKVAEETGGKITITEDVDKAVLGADVLYSDIWVSMGEDE
EVWKKRLEILYPYQINKELLKKTNNNNNVKFMHCLPSFHDLNTIDSKAIHDKFGIDPFEVTDEVFESEASLVFDEAENRM
HTIKAVMVATLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 5e-98 63
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-96 63
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-96 63
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-96 63
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-96 63
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-96 63
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-96 63