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Name : Clopa_2063 (Clopa_2063) Accession : YP_007940626.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : - COG ID : - EC number : - Position : 2078590 - 2081202 bp Length : 2613 bp Strand : + Note : PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I DNA sequence : ATGGAAAGATTGCTTATATTAGATAGCAATAGTCTTATGAACAGAGCTTTCTATGCGATACCTGCCCTTAATAATGCAGA GGGATTAAATACAAATGCTATTTATGGTTTTATAAATATGCTCTTTAAAATGAGAGAGGAATTAAAGCCTGATTACATAG TTGCAACTTTTGATAAAAAAGCTCCCACTTTTAGACATAAGGAGTACAAAGATTATAAGGCTGGAAGGAAGAAAATGCCC CCAGAGCTTGCAGAACAATTTCCAGTAGTTAAGGAACTTCTTGAAAAGTTGGCTATAAACATATTTGAAATTGAAGGCTT TGAAGCAGACGATTTAATAGGAACCCTGGCTTCCTTTTCAAGAGATCGTGGAATAGAAGTTTACATAGTTACAGGAGATA GAGATGCACTTCAACTGGCAGAGGATAATGTAAAGATAGTTATAAATAAAAAGGGTATGACTGAAAAGGAAATTTATGAT AAGGACAGAATGCTTCTGGACTATGGTGTTACTCCTAAGCAGTTTATAGATGTAAAGGGACTTATGGGAGACAGCTCGGA CAATATTCCAGGAGTGCCTGGCATTGGAGAAAAAACGGCACTTAAGCTTATAAAAGAATATGACAGTGTGGAAAATGTTC TTATGAACATAGAAAATATAAGCGGGAAAAAGATTAAGGAAAATCTCATGGAGTATAGTGAACAGGCAGTATTTAGTAAA AAACTTGCAACTATAATAACTAATGTTCCAATAGAAATAGATTTAGAGTCTATAAAATCAAAAGACAATTTTGATGTAAA AGCTGTAAGAAAAATGTTTTTAAAGCTTGAATTCAAAAGTCTCATGAATAAAATTCCTGATTCAGAGGAGGAAGAGGCTG TAATTGAAGTAAAAGCAGATTATGAAGTTTTGGATACTATAGAAAAACTTAAAAAGTTTACTTCCTCAGTAAAAGACGCT ATATATATCCTATTCGAAAATGAAAATGAGAATGTATACTCTAAAAGTGTTATAAAGAAAATATATGTGAATCTACAGGA TAAAAACTATGTAATTGACTATGATAAGCTTTTTAAAGCTGATTCAGAAGAATTGAAACTAGTTCTAAAATCGGTTTTTG AAAATGAAGAAATAGACAAAATAATTCATGATGCTAAAATACCTTATACTATACTTGATAAAATAGGTATTTCATTAAAG GGGTTGATTTTTGACACAAAAATAGCGGCTTATCTTATTGACCCTGCTAAAAGTGAATACCAATTAAATGGCTTAATAAG GGATAGCTTAAATATAGATATAAAGGATGAAGATGAGCTCCTTAGAGTAAAAGAAGTACAATATCTAAAAGCTATATATG AGGATTTAAGTGCAAAGATTAAGCTTTTAAATATGGAAGAATTATTTTATGATGTGGAAGAACCCTTAATAGAAGTGCTT TCTTCTATGGAAGGTAGGGGCTTTAAGGTTGACAGGGTAAAGCTTAATGAATTGGGAGAGCAATTCAGTGAAAAAATACA GCAGACTCAGGAGGAAATCTATAGTATTTCTGGAGAGGAGTTTAATATAAGCTCTCCAAAGCAGCTTGGTAAAATTCTAT TTGAAAAGCTTGATTTACCTGTGATTAAAAAGACCAAAACAGGTTATTCCACCAATGCAGAGGTGCTGGAAAAGTTAAGG GATAAGCATCCTATTATAGATAAAATAACTTACTATAGGCAGCTTACAAAATTGTATTCTACTTATGTGGAGGGTTTAAA AGCTGTTATTGATGTGGATGATAAAATACACTCCAGCTTTAATCAAACAGTTACAACTACAGGAAGACTTTCAAGCACAG AACCTAACCTTCAGAATATACCTATAAAACATGAAATGGGGAGAGAGATAAGAAAGGTATTTATACCTGACAGCTCAGAA TGTGTAATTTTGTCTGGAGATTATTCGCAAATAGAACTAAGGGTGCTTGCTCATATTGCCGATGATGAAAATCTAATAAA TGCCTTTAAACATCATAGTGATATACATACTAAAACTGCATCAGAGGTGTTTAATGTGCCAATTGATCAGGTAACGCCAC TTATGAGAAGTAATGCAAAGGCAGTTAATTTTGGTATAGTTTACGGCATCGGGGATTTTAGTCTTGCACAAGACCTTAAA ATAACCAAAAGTAAAGCGAAAGAATATATAGATACCTATTTTGCAAGATATCCTAATGTAAAAAAATATCTGGAAGATAT TGTTGTTAAGGCAAAGGAAGAACTATATGTTACAACTATATTAAATAGAAGAAGATATATTCCAGAAATAAAGGCAAGAA ATAAAATGGTAGCTTCCTTTGGTGAAAGACTCGCCATGAATACCCCTATACAGGGAAGTGCAGCAGATATAATTAAACTT GCAATGGTAAAGGTATATGAAAAACTTAACAAAGAAAAATTAAAGAGCACTATTATACTTCAGGTTCATGATGAACTTAT TTTGAATGTATATAAGGATGAACTAGAAAAAGTAAAAAAACTGGTTAAGGATGAAATGGAAAACGCAATAGAATTAAAGG TTCCATTAGAAGTAGATATAAATATAGGGGAAACCTGGTACGAAGCAAAATAA Protein sequence : MERLLILDSNSLMNRAFYAIPALNNAEGLNTNAIYGFINMLFKMREELKPDYIVATFDKKAPTFRHKEYKDYKAGRKKMP PELAEQFPVVKELLEKLAINIFEIEGFEADDLIGTLASFSRDRGIEVYIVTGDRDALQLAEDNVKIVINKKGMTEKEIYD KDRMLLDYGVTPKQFIDVKGLMGDSSDNIPGVPGIGEKTALKLIKEYDSVENVLMNIENISGKKIKENLMEYSEQAVFSK KLATIITNVPIEIDLESIKSKDNFDVKAVRKMFLKLEFKSLMNKIPDSEEEEAVIEVKADYEVLDTIEKLKKFTSSVKDA IYILFENENENVYSKSVIKKIYVNLQDKNYVIDYDKLFKADSEELKLVLKSVFENEEIDKIIHDAKIPYTILDKIGISLK GLIFDTKIAAYLIDPAKSEYQLNGLIRDSLNIDIKDEDELLRVKEVQYLKAIYEDLSAKIKLLNMEELFYDVEEPLIEVL SSMEGRGFKVDRVKLNELGEQFSEKIQQTQEEIYSISGEEFNISSPKQLGKILFEKLDLPVIKKTKTGYSTNAEVLEKLR DKHPIIDKITYYRQLTKLYSTYVEGLKAVIDVDDKIHSSFNQTVTTTGRLSSTEPNLQNIPIKHEMGREIRKVFIPDSSE CVILSGDYSQIELRVLAHIADDENLINAFKHHSDIHTKTASEVFNVPIDQVTPLMRSNAKAVNFGIVYGIGDFSLAQDLK ITKSKAKEYIDTYFARYPNVKKYLEDIVVKAKEELYVTTILNRRRYIPEIKARNKMVASFGERLAMNTPIQGSAADIIKL AMVKVYEKLNKEKLKSTIILQVHDELILNVYKDELEKVKKLVKDEMENAIELKVPLEVDINIGETWYEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 6e-153 | 44 |
