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Name : Clopa_0020 (Clopa_0020) Accession : YP_007938808.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 24703 - 25983 bp Length : 1281 bp Strand : + Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGTTAGATTTAAAAAGAATAAGAACAAATCCAGAGGAGATCAAGAAATTACTCACTAATAGAGGTGAGGATTTTGATTT GGGTGATATTGATAAGGTAGTAGAATTAGATGAGAAAAGAAGAAAAATTCTTGTAGAAGTTGAAAATTTGAAAAGTAAAA GAAATAAAGAATCTGCTGAAATTGCAAAGCTAAAAAGGGCTGGTGAAAATGCAGATAATTTAATGGCTGATATGAAAAAA CTTTCTGAAGAAATAAAAACTTTAGATGGAGAAGTAGTAAAAGTAGATGAAGAATTAGATTATATAATGATGAGAATACC AAATATACCTCATGAAAGTGTACCGGAAGGTAAATCTGATGAGGACAATGTTGAAATAAGAAAATGGGGAGAACCAAGAA AGTTTGATTTTGAATTAAAAGCACATTGGGATATTGGAAAAGATCTTAATATATTGGATTTTGAAAGAGCAGGAAAAGTG ACTGGATCACGATTTACTTTTTATAAAGGTCTAGGTGCAAGACTGGAAAGATCAGTTATAAACTTTTTCTTAGATACACA TGTTGAAAAGCATGGTTATACAGAAATTTTACCACCATATATGGTAAATAGAGATAGTATGACTGGAACCGGTCAACTTC CTAAATTTGAAGAGGATGCGTTTAAGGTTGAAAACAATGGGTTTTTCTTAATTCCTACAGCAGAAGTACCTGTTACAAAT CTATTTAGAGATGAAACGCTAAAGGGAGAAGATTTACCTATAAAATTTGCTGCATATAGTGCCTGTTTTAGATCAGAGGC TGGTTCAGCTGGAAGAGATACTAGAGGGCTTGTTCGTCAACACCAATTCAATAAAGTAGAGCTTGTTAAATTTGCTAAAC CTGAGCAGTCCTATGAGGAGCTTGATAAACTTACTGCAGATGCAGAAGAAATACTTCAGATTTTAGGTATTCCTTATAGA GTAGTTAGAATATGTAAAGGTGATTTAGGGTTTACTGCTGCAATAAAATATGATATTGAAGTTTGGATGCCAAGTTACAA TAGATATGTTGAAATCTCAAGCTGCAGTAATTTTGAAGATTTCCAGGCAAGACGTGCCAATATAAGATATAAAGAAGATG CTAAATCTAAACCACAATTTGTTCATACTATTAACGGTTCAGGATTGGCAGTAGGTAGAACTGTGGCTGCTTTACTGGAA AATTATCAAAATGAAGATGGAACTGTAACTATACCAGAAGCTTTAAGAGCATATATGGGCGGAAAAGATTTAATAAAATA A Protein sequence : MLDLKRIRTNPEEIKKLLTNRGEDFDLGDIDKVVELDEKRRKILVEVENLKSKRNKESAEIAKLKRAGENADNLMADMKK LSEEIKTLDGEVVKVDEELDYIMMRIPNIPHESVPEGKSDEDNVEIRKWGEPRKFDFELKAHWDIGKDLNILDFERAGKV TGSRFTFYKGLGARLERSVINFFLDTHVEKHGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKVENNGFFLIPTAEVPVTN LFRDETLKGEDLPIKFAAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFAKPEQSYEELDKLTADAEEILQILGIPYR VVRICKGDLGFTAAIKYDIEVWMPSYNRYVEISSCSNFEDFQARRANIRYKEDAKSKPQFVHTINGSGLAVGRTVAALLE NYQNEDGTVTIPEALRAYMGGKDLIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-130 | 64 |
