Gene Information

Name : Clopa_1812 (Clopa_1812)
Accession : YP_007940394.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1852702 - 1853250 bp
Length : 549 bp
Strand : -
Note : PFAM: Integrase core domain

DNA sequence :
GTGCATTCGGTTGAAAAGATGTGCAAATTATTTCATGTGTCACGGAGCGGTTATTATAACTGGAAAAATGACTCAAAATG
TAAAAGAAAACTCGAAAATGAAAAAATATTAAAAGTGGCCCAAAATAGTCATGATCAAAATAAAGGTATTTATGAACTTG
ATAAAATGCTGTCTGATGTAAGAGAGAAATTCCCTCATTGCAGCCGTAAAAGGCTATATAACATACAAAAACATAATAAA
TTATATTTAATAAGAAAGAGAAAATTTAAAGCAACTACTTACTCAAATCATAATCTTCCAGTAGCAAATAACCTATTAAA
TCAGAACTTCAATATAAATAAACCAAATACTGTTTGGGTTACCGATATATCCTATATTAGCACCCGTGAAGGGTGGTTAT
ATCTTGCAGCGGTAAAAGACATATGCACTAAAGAAATAGTAGGATGGGCCACTGCTGACAACATGAAAACGTCACTATGT
ATAAAAGCACTTGATAATGCTATCAAACTATTCAAGCCTGCTGGATGGAGGACTCATACACCATTCTGA

Protein sequence :
MHSVEKMCKLFHVSRSGYYNWKNDSKCKRKLENEKILKVAQNSHDQNKGIYELDKMLSDVREKFPHCSRKRLYNIQKHNK
LYLIRKRKFKATTYSNHNLPVANNLLNQNFNINKPNTVWVTDISYISTREGWLYLAAVKDICTKEIVGWATADNMKTSLC
IKALDNAIKLFKPAGWRTHTPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39293.1 hypothetical protein Not tested LPA Protein 1e-24 44