Gene Information

Name : Clopa_1750 (Clopa_1750)
Accession : YP_007940344.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : DNA repair protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1786942 - 1787379 bp
Length : 438 bp
Strand : +
Note : PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc

DNA sequence :
ATGAATATTCAAATCGTATCAATTAAAATGGTAAAGGAAAAAGATTTACACTATGAGTATGAAAGTATTTCTAGGGTTCC
ACAATCAGCAGAGTTGGTTAGAAAGGTTATAGGTGATATGGATAGAGAGGCTTTTGTAGTTATAACATTAGATACTAAAA
ATCACCCAACTTCAATAAATGTAAACTCTATTGGGAATTTAAATTCTTCTATTGTACATCCTAGAGAAGTATTTAAAACA
GCAATATTAGGAAATGCTGCAAGTATATTAGTGGGACATAATCATCCGTCAGGGGATACATCACCAAGTAAAGAAGATAT
TAATGTCACTAATAGATTAAAGGAAGCAGGAAGAATATTAGGGATAGAAGTATTAGACCATATAATAGTTGGTAGTTTTA
ATAACTACATAAGTTTAAAGGAAAAAGGGCTTTTATAA

Protein sequence :
MNIQIVSIKMVKEKDLHYEYESISRVPQSAELVRKVIGDMDREAFVVITLDTKNHPTSINVNSIGNLNSSIVHPREVFKT
AILGNAASILVGHNHPSGDTSPSKEDINVTNRLKEAGRILGIEVLDHIIVGSFNNYISLKEKGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00320 YP_005754047.1 hypothetical protein Not tested Type-XI SCCmec Protein 1e-26 49
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 2e-13 42