Gene Information

Name : Clopa_1714 (Clopa_1714)
Accession : YP_007940312.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : ABC-type multidrug transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1750738 - 1751634 bp
Length : 897 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGAATAATATTATTAGAACAATAAATTTAACAAAAAAAATTAAAGAGGTTACTATAGTAAATAAGATAAATATTAATTT
AGAACAGGGAGATATATATGGATTTTTAGGACCAAATGGTTCAGGAAAAAGTACTACAATAAAGATGATGCTTGGTCTTG
TAAAACCAACAGAAGGTAGAGTTGAAATAAATGGTTATGATGTTTGGAAAGATAAAAAGAAAGCTTTAAATTCTATTGGT
GCAATGATAGAAAATCCTAGTTTTTATGATTACTTAAGTGGATATAAAAATTTAGAGTTATATAAGAATTTATATGATTT
ACCCAAAACTAGAATTAATGAAGTACTCAACATTGTCGGGTTGGAAAAAGAGAAAAATAAAAAAGTTAAAAAATATTCAT
TAGGAATGAAACAACGGTTAGCTATTGCAAGAGCTTTTATAAATTATCCTAAAATAGTTATATTGGACGAGCCTACAAAT
GGTTTGGATCCAGTAGGAGTTGTAGAAATAAGAAATTTAATAAGAGATCTTTCTGTAAAAGAAAATATAAATTTTATAAT
ATGTTCTCATATATTAAGCGAAATACAAGAACTTTGTAATAAAGTCTCAATAATTAATAAGGGTGAACTTATAAGTGAAG
GATATGTTAAGGATTTATTAAATCAAGAATTTGATGAATACTTTATAGATACTTCTGATTTACAAAAAGCAAAAGTTATA
TTAGAAAAATTTGAAGTAGTGAAATCAATAAGTATACATGATAACATAATTCAAATTAATATTGATAAAGGAAAAATAGG
AGAAATAAATAAAAAGCTAGCTTTAAATGATATAGATATCACATCTATAAAGAAGAAAGAAAATACACTAGAATCATACT
TTTTAAGTACATTATAA

Protein sequence :
MNNIIRTINLTKKIKEVTIVNKININLEQGDIYGFLGPNGSGKSTTIKMMLGLVKPTEGRVEINGYDVWKDKKKALNSIG
AMIENPSFYDYLSGYKNLELYKNLYDLPKTRINEVLNIVGLEKEKNKKVKKYSLGMKQRLAIARAFINYPKIVILDEPTN
GLDPVGVVEIRNLIRDLSVKENINFIICSHILSEIQELCNKVSIINKGELISEGYVKDLLNQEFDEYFIDTSDLQKAKVI
LEKFEVVKSISIHDNIIQINIDKGKIGEINKKLALNDIDITSIKKKENTLESYFLSTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-49 49
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-42 48
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 2e-35 43
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 2e-35 43
SH2304 YP_254219.1 ABC-type multidrug transport system, ATPase Not tested ¥ðSh1 Protein 5e-30 41