Gene Information

Name : Clopa_1455 (Clopa_1455)
Accession : YP_007940107.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1522258 - 1523007 bp
Length : 750 bp
Strand : +
Note : PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH

DNA sequence :
ATGCGTTTTGACGGAAGAAAATTTGATCAGATGAGACCGGTTAATGTAATAAGAAACTACACTAAATATGCTGAAGGTTC
AGTTTATATCGAAGTGGGGGACACTAGAGTTATATGCAATGTATCTATTGAGGATAAAGTACCCATATTTTTAAGAGGTA
AAGGAGAAGGATGGATTACCTGTGAGTATAATATGCTTCCTAGAGCAACGCAGATTCGTAAAATTAGAGATATAACAAGG
GGAAAAATAGATGGAAGAACTATGGAGATACAAAGACTCATAGGAAGAGTTTTAAGGTCAGTAGTTGATCTCAAGGCGCT
TGGAGAAAAGACCCTTTGGATTGATTGCGATGTAATTCAGGCAGATGGCGGTACACGTACTACTGCTATTACTGGTGCAT
TTATAGCTATAGTAGATGCGGTAAATAAATTGCATAGGAAAAAGAATTTCAAGGTATATCCTATTAGAAAATATTTGAGT
GCCATAAGTGTAGGTATAGTAAATAATGAAAAACTCTTAGATCTGTGTTACGCGGAAGATTCCAATGCACAGGTGGATAT
GAATATTGCAATGACAGATGATGGAGAATTTGTGGAAATACAGGGCACTGGAGAGGAAAAACCCTTTTCAAGAAAAGATT
TGAATCAACTAATGGATTTGGGAGAAAATGGCATAAAAAAGATGATTGAAATAGAAAAACGCAGTCTTAAAATGGATGCA
CTTTGGATTGGAACAGGAGATAAGAAATGA

Protein sequence :
MRFDGRKFDQMRPVNVIRNYTKYAEGSVYIEVGDTRVICNVSIEDKVPIFLRGKGEGWITCEYNMLPRATQIRKIRDITR
GKIDGRTMEIQRLIGRVLRSVVDLKALGEKTLWIDCDVIQADGGTRTTAITGAFIAIVDAVNKLHRKKNFKVYPIRKYLS
AISVGIVNNEKLLDLCYAEDSNAQVDMNIAMTDDGEFVEIQGTGEEKPFSRKDLNQLMDLGENGIKKMIEIEKRSLKMDA
LWIGTGDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-58 53