Gene Information

Name : Clopa_1371 (Clopa_1371)
Accession : YP_007940029.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : ABC-type multidrug transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1428067 - 1428984 bp
Length : 918 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
TTGCTAAAGGTTGAAAACTTAATAAAAAAATATGGCGATTTTGAAGTGCTTAAGGGCATTAGCTTTGAGGTTTCAAAGGG
ATGTATATACGGCTTTCTTGGTAAGAACGGTACTGGGAAAACTACTACTATGAATATACTTACAGGGCTTATAAACTATA
ACTCTGGAAATATATTTATAAATGGAAAAGATTTTAACACTAATAAAAGACAACTATTAAAAACTATAGGTTACCTGCCT
CAAGCACCAGTATTTTATGGCTATATGACTGGATATGAATATCTGAAATTTATAGGTAGCTTAAGTGGAATGTCACCTAA
AGAAGTATCTATAAGAGCGGATGAAGTTCTAGAGATAGTCCAACTTAAAAGTGCTGCTAAGCGAAAACTTTCTGGTTATT
CTGGTGGTATGAAACAACGTTTTGGACTAGCAGTAGCTCTATTTAATCATCCAGAAATATTATTTTTGGATGAGCCCACT
TCAGCTCTCGATCCTGAAGGAAGAATGGAAGTTTTATCTTTAATAGAAAAATTGAAAGCAGAAGGAATAACTGTATTTTT
GTCCTCACACATATTAAATGATATAGAAAGAGTCTGTGATGAAGTAAGTATTTTAGATAAGGGTAAAATACTAATATCTG
ATAATCTTAAGGAATTAGAAAAAAAATATATACAACCTATTTTTGATGTAGAAGTTGAAGGAGATATTAGTACTCTTACA
GAAACTTTGTTTCGTCAGCCTTTAATTGAAAATATTAAAAGCAGCAATAATCTGCTGTCTATTTACGTGAAGAATATAGA
TGAAGGTAAAAAACAACTTTTGAAGCTTATATTAGCTACCGATTGCACAGTTCTATCTTACAATATTAGAAAATCCAATC
TTGAAGACATATTTATGAGGATGGTGATAAAGGAATGA

Protein sequence :
MLKVENLIKKYGDFEVLKGISFEVSKGCIYGFLGKNGTGKTTTMNILTGLINYNSGNIFINGKDFNTNKRQLLKTIGYLP
QAPVFYGYMTGYEYLKFIGSLSGMSPKEVSIRADEVLEIVQLKSAAKRKLSGYSGGMKQRFGLAVALFNHPEILFLDEPT
SALDPEGRMEVLSLIEKLKAEGITVFLSSHILNDIERVCDEVSILDKGKILISDNLKELEKKYIQPIFDVEVEGDISTLT
ETLFRQPLIENIKSSNNLLSIYVKNIDEGKKQLLKLILATDCTVLSYNIRKSNLEDIFMRMVIKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 1e-24 41
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-28 41