Gene Information

Name : Clopa_1316 (Clopa_1316)
Accession : YP_007939979.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : ABC-type multidrug transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1375720 - 1376655 bp
Length : 936 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGAAGATAGTAAAAATTGAAAATTTAGTGAAAAAGTTTGGAAATACGGCAGCTGTAGATAAAATCACACTGGGCATTGA
AGAAGGCGAGATATATGGACTTTTAGGTCCTAATGGAGCCGGAAAGAGTACAACTATAAATATGATCTGCGGGTTACTCT
CACCTAATGAAGGCACTATTGAAATACTGGGAAAAGACATAAGAAAGAATAAAATATTTGCAAAGAGAAATATAGGAATA
GTTCCTCAGGATATAGCTATATATGAAGATCTCACTGCTTATGAAAATGTAAATTTTTTTACAGGGTTATATGGTTTTAG
AGGAAAAGAACTAAAGACAAGAGTAGAAAAAGCACTAGAATTTGTTGGACTTTTAGATAAGGCTAAAAGCTTTCCAAAAA
GATTTTCTGGTGGTATGAAGAGAAGATTGAATATTGCCTGTGCCATTGCCCACAGACCTAAGGTCATAATAATGGATGAA
CCTACCGTTGGAATTGATCCACAGTCAAGAAATCATATACTTCAGTCTGTTAAGAAATTAAATGAAATGGGAAGCACAAT
CATATATACTAGTCATTATATGGAAGAAATAGAGGAGATATGCACAAGAATAGGTATAGTAGATCATGGAAAGCTTATAG
CAGAGGGTACAAAGGATGAATTGAAAAGCAGCATTTCTGATACAAATACAATTTGGGTAACTGTACAATCTTTAAACGAT
TTTCAATTAGATGAATTAAAGGAGATTAATGGAGTTATAGGTGCTGAATTGGATGATAATATTGTTAAGATAAGCAGTTC
ACAGGATGTAAATAATCTGGATAAAATAATTTTGCTTTTTACTGGAAAGAATATCCATATAAAAAATGTAGAGACAAAGA
CACCTGATTTGGAAACTGTATTTCTTACTCTTACTGGTAGAAAGCTTAGAGATTAG

Protein sequence :
MKIVKIENLVKKFGNTAAVDKITLGIEEGEIYGLLGPNGAGKSTTINMICGLLSPNEGTIEILGKDIRKNKIFAKRNIGI
VPQDIAIYEDLTAYENVNFFTGLYGFRGKELKTRVEKALEFVGLLDKAKSFPKRFSGGMKRRLNIACAIAHRPKVIIMDE
PTVGIDPQSRNHILQSVKKLNEMGSTIIYTSHYMEEIEEICTRIGIVDHGKLIAEGTKDELKSSISDTNTIWVTVQSLND
FQLDELKEINGVIGAELDDNIVKISSSQDVNNLDKIILLFTGKNIHIKNVETKTPDLETVFLTLTGRKLRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 5e-29 42