Gene Information

Name : LA14_0079 (LA14_0079)
Accession : YP_007936991.1
Strain : Lactobacillus acidophilus La-14
Genome accession: NC_021181
Putative virulence/resistance : Unknown
Product : Mobile element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 77544 - 79250 bp
Length : 1707 bp
Strand : -
Note : -

DNA sequence :
ATGTATCAAAATTATATCACAGGTCAAACTGCTTTAACACTTAATCTGGACTTTACTATTCCTAGCAATCATTTAGCTAA
TATCATCAGCCAGTTTGTGGATTCCATTCCTGAAGATGTCTTGCTAGGAAAAACTGCTAAAACAGGCCGCCCTGCTTATC
ATCCAGCCATGATGCTTAAAATTTTACTTTTCGCATATTCTAGAAGAGTATTTTCAGGCAGAAAAATTGAATTAATGCTG
GAAGAAAATGTGCCTATGATGGTACTAGCAGACCATCAAAAGATTTCATACCATACTATCAATAACTTTAGATCTAGCAA
TCACGCCAATGAGTTGGTTAAGAAAAGCTTTCTTTATTTTACGAATCTTTTAGAAGCAGAAGGTCTAATCAATGAAGGTG
CTGTCTTTATCGATGGTACTAAGATCGAAGCCGATGCCAATCGCTATACTTTCGTTTGGCGCAAAGCAGTTGAAAAGTTT
CATAAAAAGCTAAAAGGCCAAGCAGTTGAGCTTTATGATGAACTGATCGCCAAGGAAGTAGTCAAAGCAATGGCTCAAGA
GAAAGTCCGGACTAGTCAAGGCTTGGCAGAACTAGCACAAGAAACAGAAGCAGAAATTGAAAAGCTGACTAAAAAAATTG
AACAAGAGCCCAGGGCTATTCCTGGTGGTTCACCTAGAAAAGCAAGAAGACGCAGGCTTAAAAAGCTGCTTCATAAACTG
AGGAAAGACTATGTTCCTAGAATGAAGAAATACGAAGAAGCAGAAGAAATCTTTGCTGGCCGCAATAGTTATTCCAAGAC
CGACCACGATGCGACTTTCATGCATATGAAAGAAGATCATATGAAGAACGGTCAGCTTAAGCCAGGCTACAATATTCAAG
CAGCTACTACAAATCAGTATGTAGTTGACTTTGCTTTATATCATAATCCTACTGATTTCAGAACTTTAGAACCATTTTTA
AAGCAGATGTCCACGCTGGATAAGTTTGATAAGATTGTCGCCGATGCTGGTTATGGCAGCGAGGACAATTATTCTATGCT
AGAAAAAGAACATCCAGACAAAAAATACTACATTCCCTACACCATGTATGAAAAGGAAAAGACCAGAAAATATCGTAGTG
ATCCAACTAGGCTGGCTAACTGGTTCTATGATGAAAAGGATGATTACTATCTAGATCAAAATGGAGTCCGATTCAATTTC
AAATATTACAGCCGGCGCAAAGATCGCTCGACTGACCAGGTTCGTGATTTTAAGGTTTATGAAGCAGATGAGTTTCAACT
GACGCCAGAATTAGAGCGTTTAGCTAAAACCAAGAGCGGCCGACAACGTCAAGTACGCTACAATCCCAACTGGCAGTATT
TAAAAGAAAAAGCTAAAGAAGTTCTCCAAAGTCCTGAGGGCAGACACATCTATAGTATGAGAAAGTATGATGTGGAGCCA
ATTTTTGGACATTTGAAGAACATCTTTGGCATACGCCGAACTCATTTAAGAGGCAAAAAGAAGGTTGAAACGGATGTTGG
AATAGCCTTCATAATGATGAATTTAAGCAAATATTGGAACAGAAGATGGTCTCGGGTCCAATCTTCTTTATGCAAAATAA
AAAAGGCGGTCAAGCAACTCAAATCAAGAGTTGGATTGATCGTCTTTTGGTATCTGAGGATTAGTTATTTCCCAGACACT
TTTCTATTTACCTCTTGTGTTATATAG

Protein sequence :
MYQNYITGQTALTLNLDFTIPSNHLANIISQFVDSIPEDVLLGKTAKTGRPAYHPAMMLKILLFAYSRRVFSGRKIELML
EENVPMMVLADHQKISYHTINNFRSSNHANELVKKSFLYFTNLLEAEGLINEGAVFIDGTKIEADANRYTFVWRKAVEKF
HKKLKGQAVELYDELIAKEVVKAMAQEKVRTSQGLAELAQETEAEIEKLTKKIEQEPRAIPGGSPRKARRRRLKKLLHKL
RKDYVPRMKKYEEAEEIFAGRNSYSKTDHDATFMHMKEDHMKNGQLKPGYNIQAATTNQYVVDFALYHNPTDFRTLEPFL
KQMSTLDKFDKIVADAGYGSEDNYSMLEKEHPDKKYYIPYTMYEKEKTRKYRSDPTRLANWFYDEKDDYYLDQNGVRFNF
KYYSRRKDRSTDQVRDFKVYEADEFQLTPELERLAKTKSGRQRQVRYNPNWQYLKEKAKEVLQSPEGRHIYSMRKYDVEP
IFGHLKNIFGIRRTHLRGKKKVETDVGIAFIMMNLSKYWNRRWSRVQSSLCKIKKAVKQLKSRVGLIVFWYLRISYFPDT
FLFTSCVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 4e-77 42
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 4e-77 42
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 4e-77 42
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 3e-77 42
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 1e-74 42
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 9e-72 41