Gene Information

Name : LA14_0769 (LA14_0769)
Accession : YP_007937621.1
Strain : Lactobacillus acidophilus La-14
Genome accession: NC_021181
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator, OmpR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 732631 - 733335 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGGTTGAAGATGACAACTCCGTTGCTGAAATGATGGGGATGTTTTTCAAAAAAGAAGGTTGGCAACAAGATATTGCTGT
TGACGGTGTCGAAGCCGTCGACATGTTTAGAAAAAATGCAGATAAGTATGATTTAATTACTTTGGATTTGAATTTACCTA
AAAAAGACGGTATTCAAGTTGCCAAAGAAGTGAGAGCAATTTCACCTACTGTACCAATTATTATGCTTACTGCTAGGGGA
AGTGAATCAGATCAAGTACTAGGTCTTGGTATTGGAGCTGATGAATATGTCACTAAACCTTTTAGTCCAATTGCTTTAAT
TGCTAGAATCAAGGCACTTCATCGTAGAGTTATGATGGAAGAAGAGCCGGATACTGCTAAAGAAGATAAGCAAGATTATG
AAATTACCACAAAACACCTAAAAATTTCTAAAAATAGACGAGAAGTATTGTTTGACAAGCAACCTGTAACTAATTTAACT
CCAAAGGAATTTGACTTGCTTTATACGATGGCTCAAAAGCCTAAGCAAGTCTTTTCTCGTGAACAATTATTAGAGCTGGT
TTGGGGATATGAATACTACGGAGAAGAAAGAACAGTAGATGCTCATATTAAGAAACTGCGCCAAAAATTAGAGAAAGTTG
GAGCTAAAGTTATCCAAACCGTTTGGGGAGTTGGATATAAGTTTGATGATTTGCAGGTAGAATAA

Protein sequence : 
MVEDDNSVAEMMGMFFKKEGWQQDIAVDGVEAVDMFRKNADKYDLITLDLNLPKKDGIQVAKEVRAISPTVPIIMLTARG
SESDQVLGLGIGADEYVTKPFSPIALIARIKALHRRVMMEEEPDTAKEDKQDYEITTKHLKISKNRREVLFDKQPVTNLT
PKEFDLLYTMAQKPKQVFSREQLLELVWGYEYYGEERTVDAHIKKLRQKLEKVGAKVIQTVWGVGYKFDDLQVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-34 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family CP001918.1.gene5135. Protein 1e-24 43
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_002952.2859905.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_002745.1124361.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_009782.5559369.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_002951.3237708.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_007622.3794472.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_003923.1003749.p0 Protein 1e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_002758.1121668.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_009641.5332272.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_013450.8614421.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_007793.3914279.p0 Protein 2e-38 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family HE999704.1.gene2815. Protein 3e-37 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family AF155139.2.orf0.gene Protein 4e-40 41
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family FJ349556.1.orf0.gene Protein 5e-38 41
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family NC_012469.1.7685629. Protein 4e-36 41
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family AE000516.2.gene3505. Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family VFG1563 Protein 3e-34 42
LA14_0769 YP_007937621.1 DNA-binding response regulator, OmpR family VFG1702 Protein 2e-34 42