Gene Information

Name : SFUL_6402 (SFUL_6402)
Accession : YP_007935169.1
Strain : Streptomyces fulvissimus DSM 40593
Genome accession: NC_021177
Putative virulence/resistance : Virulence
Product : Sphingomyelinase C
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.4.12
Position : 7186378 - 7187367 bp
Length : 990 bp
Strand : -
Note : Bacterial hemolysins are exotoxins that attack blood cell membranes and cause cell rupture. Beta-hemolysin is a phospholipase C with specific activity toward sphingomyelins. Has a high specificity for sphingomyelin, hydrolyzes lysophosphatidylcholine at a

DNA sequence :
GTGCCGCACTCCGCTTTCCGCCGCCTTTCCGGCGTAGCACTCTCCGCCGCCCTCGCCGCCGTCCCGCTGGCTGTGAACAC
ACCCCAGGCAGCGGCGGCCGGCACCGCCGACACCCCGTCGCTGCGGGTGCTCTCGTACAACACGTTCATCTTCAGCAAGA
CCCTGTACCCCAACTGGGGCCAGGACCACCGGGCGGCGGAGATCCCGAAGACGTCGTTCTTCCGGGGCAACGACGTGGTC
GTGATCCAGGAGGCCTTCGACAACGGCGCCTCCGACGCACTGCTGCGGAACTCCGCCGCCCAGTACCCGTACCAGACCCC
GGTGGTCGGCCGGAGCAAGAGCGGCTGGGACGCCACCAGCGGCTCGTACTCGGCGACGACCCCGGAGGACGGCGGCGTCA
CGATCCTGAGCAAGTGGCCGATCGTCCGCAAGGAGCAGCACGTCTACAAGGACGCCTGCGGCGCCGACTGGTGGTCCAAC
AAGGGCTTCGCCTACACCGTGCTGAACGTCAACGGCGCCCGCGTCCACGTCGTCGGTACCCACGCCCAGTCGACCGACCC
CGGCTGTTCGGCGGGCGAGGCCGCCCAGATGCGCAGCCGCCAGTTCAAGGCGATGGACGCCTTCCTGGACGCCAAGAAGA
TCCCGGCCTCCGAACAGGTCATCGTGGCGGGCGACTTCAACGTGGACGGGCACTCCGCCGAGTACGCCTCCTTCCTCAAG
GACGCGGACCTGGCCCCGGCCGACACCAAGACGGGCCACACGTACTCCTTCGACACCCGCGACAACTCGATCGCCTCCGA
GCGCTACCCGAACGACCCCCGGGAGGACCTGGACCACGTCCTGCACCGCACGGGCCATGTGAAGCCGTCGGGCTGGAAGA
ACGACGTCGTCAAGGAGCAGAGCGCCCCCTGGACGGTCTCCAGCTGGGGCACGAACTACACGTACACGAACCTCTCCGAC
CACTACCCGGTGATCGGCTCCGCCAACTGA

Protein sequence :
MPHSAFRRLSGVALSAALAAVPLAVNTPQAAAAGTADTPSLRVLSYNTFIFSKTLYPNWGQDHRAAEIPKTSFFRGNDVV
VIQEAFDNGASDALLRNSAAQYPYQTPVVGRSKSGWDATSGSYSATTPEDGGVTILSKWPIVRKEQHVYKDACGADWWSN
KGFAYTVLNVNGARVHVVGTHAQSTDPGCSAGEAAQMRSRQFKAMDAFLDAKKIPASEQVIVAGDFNVDGHSAEYASFLK
DADLAPADTKTGHTYSFDTRDNSIASERYPNDPREDLDHVLHRTGHVKPSGWKNDVVKEQSAPWTVSSWGTNYTYTNLSD
HYPVIGSAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 5e-56 49
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-56 48
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-56 48
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 3e-57 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFUL_6402 YP_007935169.1 Sphingomyelinase C VFG1798 Protein 2e-60 47
SFUL_6402 YP_007935169.1 Sphingomyelinase C VFG0674 Protein 2e-57 42