Gene Information

Name : SFUL_5953 (SFUL_5953)
Accession : YP_007934721.1
Strain : Streptomyces fulvissimus DSM 40593
Genome accession: NC_021177
Putative virulence/resistance : Unknown
Product : Integrase catalytic region
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6645634 - 6646518 bp
Length : 885 bp
Strand : -
Note : transposase; UniProt-pubmed:20703316; UniProt-pubmed:19258263; UniProt-pubmed:8973350

DNA sequence : 
GTGATCGACCACCTGCGTCACAGAGGTCTCGGGGTCGATCCCGTCTGCCGGGTGCTGGAGCTGTCGCCGTCGACGTACTT
CGCCCGCAAGAAGCGGCCGAAGTCCGTCCGCCGGCTCCGCGACGAACAGCTCATGCCGCTGATCGAAGAGGTCCACGCCG
AGTCGGGCGGCATCTACGGCGCCCGCCGGATCACACGGGCCCTCGGGCGCAAGGGCGTCGAGGTGGCCCGCTGCACCGTC
GAGCGGCTGATGGCCGAGCTCGGCCTGGAAGGCGTCATCCGAGGCCGGCGGCGCCGGACCACGGTTTCAGAGCCGTCGGC
GCCGCGTCCGCCGGACCTGGTCGACCGCGACTTCACCGCCTCCCGGCCCGACCAGCTGTGGGTCGCGGACATGACCTATG
TCCGCACCTGGTCGGGATGGGCGTATGTGGCGTTCGTCCTGGACGTGTACTCGCGGATGATCGTCGGCTGGCAGGTCGCG
AACCACATGCGGACAGAACTCCCGCTGGACGCCCTGGAGATGGCGCTGTGGCGACGTCGGATCAAGAAGGACTCCGGGCT
GATACATCACAGCGACCGCGGGTCGCAATACGTATCAATTCGGTATACCGACCGGCTCTCTGACATCGGTGCCTCCGCGT
CGGTCGGCTCCGTCGCGGACAGCTACGACAACGCGATGGCCGAGGCCCTGAACGGCACCTTCAAGGCCGAGCTGATCGAG
ATGCAGGGCCCCTGGAAGGACGTCGACCAGGTCGAGCGGGCGATCTTCCAGTGGATCACCTGGTACAACGAGGAGCGTCT
TCACTCCGCGCTCGACTACGTTCCGCCGGCCGAGTACGAAGAAGCCTTCTGGCGCAGCCAGGAGCAAACCCCGCAGTCCG
CCTGA

Protein sequence : 
MIDHLRHRGLGVDPVCRVLELSPSTYFARKKRPKSVRRLRDEQLMPLIEEVHAESGGIYGARRITRALGRKGVEVARCTV
ERLMAELGLEGVIRGRRRRTTVSEPSAPRPPDLVDRDFTASRPDQLWVADMTYVRTWSGWAYVAFVLDVYSRMIVGWQVA
NHMRTELPLDALEMALWRRRIKKDSGLIHHSDRGSQYVSIRYTDRLSDIGASASVGSVADSYDNAMAEALNGTFKAELIE
MQGPWKDVDQVERAIFQWITWYNEERLHSALDYVPPAEYEEAFWRSQEQTPQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 3e-43 56
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 1e-43 56
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 5e-48 54
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-53 52
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 4e-53 52
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 4e-53 52
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 4e-53 52
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-54 52
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-54 51
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 8e-55 51
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-54 51
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-54 51
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-54 51
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 8e-54 51
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-54 51
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 4e-54 51
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-54 51
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-54 51
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-54 51
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-40 51
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-52 50
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 3e-51 48
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 5e-34 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFUL_5953 YP_007934721.1 Integrase catalytic region VFG1602 Protein 1e-52 50