Gene Information

Name : SFUL_5419 (SFUL_5419)
Accession : YP_007934197.1
Strain : Streptomyces fulvissimus DSM 40593
Genome accession: NC_021177
Putative virulence/resistance : Virulence
Product : ABC-transport system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6012716 - 6013582 bp
Length : 867 bp
Strand : +
Note : UniProt-pubmed:18375553; UniProt-pubmed:17194220; iron-siderophore uptake system ATP-binding component; UniProt-pubmed:21357489

DNA sequence :
ATGACGGCGTACGAGAAGAACGAGACGCAGGACGACAACGAAAGGCGTGGCCCGGTCGTGGCTGAGCACACACTGGAAGC
CCGGGACGTCCGGCTCGGCTACGGCGACCGGGAGATCGTCCCCGGCCTGAGCGTGACGGTCCCGCCCGGACGGATCACCG
TCATCGTCGGCCCCAACGCCTGCGGCAAATCGACCCTCCTGCGGGCGATGGCACGGCTGCTCGTGCCCTCCGCCGGGGCG
GTGCTCCTCAACGGCCGGTCCATCCAGGAGATGCCGACCAAGGAGGTCGCCGCCGTACTCGGCATCCTCCCGCAGAGCCC
CACCGCGCCCGAGGGCATCACCGTCTCCGACCTGGTCGGCCGCGGCCGCTACCCGCACCAGGGCTTCTTCCGCCGCTGGA
GCGCCGAGGACGACGAGGCGGTCGCGCAGGCGCTGCTCTCCACCGACGTCCTGGAGCTGGCCGACCGGCCCGTCGACGAG
CTCTCGGGCGGGCAGCGCCAGCGGGTGTGGATCGCGATGGCGCTGGCGCAGCACACGGACATCCTGCTGCTCGACGAGCC
GACGACGTTCCTGGACGCCAGCCACCAGCTCGACGTGCTCGACCTGCTCACCGACCTCAACCGGGAACGCGGTGTCACGA
TGGTCGCCGTCCTGCACGACCTGAACCTGGCCTGCCGGTACGCGGACCACATGATCGCCATGAAGGACGGACGGATCCTG
GCGGAGGGGCGGCCGGCCGACATCGTGACGGAGGAGCTGGTCGGCGAGGTCTTCGGGATGCGCTGCTCGGTGATCGAGGA
CCCGGCGTCGGCCACCCCGATGGTGGTGCCGCTGGGCCGCCACCATGTGAAGGGGCCGACCGCCTGA

Protein sequence :
MTAYEKNETQDDNERRGPVVAEHTLEARDVRLGYGDREIVPGLSVTVPPGRITVIVGPNACGKSTLLRAMARLLVPSAGA
VLLNGRSIQEMPTKEVAAVLGILPQSPTAPEGITVSDLVGRGRYPHQGFFRRWSAEDDEAVAQALLSTDVLELADRPVDE
LSGGQRQRVWIAMALAQHTDILLLDEPTTFLDASHQLDVLDLLTDLNRERGVTMVAVLHDLNLACRYADHMIAMKDGRIL
AEGRPADIVTEELVGEVFGMRCSVIEDPASATPMVVPLGRHHVKGPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-62 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-66 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-66 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-60 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-60 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-60 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-60 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-49 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-53 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-35 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-35 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 3e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFUL_5419 YP_007934197.1 ABC-transport system BAC0164 Protein 9e-50 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFUL_5419 YP_007934197.1 ABC-transport system VFG0925 Protein 8e-78 57
SFUL_5419 YP_007934197.1 ABC-transport system VFG1042 Protein 8e-50 45