Gene Information

Name : SFUL_384 (SFUL_384)
Accession : YP_007929253.1
Strain : Streptomyces fulvissimus DSM 40593
Genome accession: NC_021177
Putative virulence/resistance : Virulence
Product : ATPase of griseobactin uptake ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 438868 - 439659 bp
Length : 792 bp
Strand : -
Note : gene_name:cbrD; UniProt-pubmed:16352867; UniProt-pubmed:18375553; gene_name:griH; UniProt-pubmed:21551299; UniProt-pubmed:19807777

DNA sequence : 
GTGGACATCCGTGTTGAACAGCTCACCGCTGGATACGCCGGTCATACCGCCGTGGACGGTGTCGATCTGACGGTCGGGTC
CGGACAGGTGGTGGCGATCGTCGGCCCCAACGGCTGCGGCAAATCGACCCTGCTGCGCTGCGTGGCCCGCCTCCACCAGC
CGCGCTCGGGCAAAGTGTTCGCCGGTGACGCCGACGTCTGGCAGCTGCGCCAGCGGGACGCCGCCCACCGCATCGCCCTG
CTGCCCCAGGCCCCGCAGGCCCCCGAGGCGGTGACCGTCGCCGGACTCGTACGGTACGGACGCCACCCGCACCAGGGGCT
GTTCCGCCAGTGGTCGCACGAGGACGAGGAAGCCGTCACCCGCGCCCTGGAGGCGACCGGCACGACCGGCCTGGCCGACC
GCCGCCTCGACCAGCTCTCCGGCGGCCAGCGCCAGCGGTGCTGGCTCGCCATGGCCCTCGCCCAGGAGACCCCGATCGTC
CTGCTCGACGAGCCCACCAGCGCGCTCGACATCGGTCACGCCGTGGAGGTCCTGGACCTGGTGCGCGAGGTCGCGGCACA
GGGCCGGACCATCGTCATGGTCGTCCACGACCTGGCCGGGGCCGCCCGGTACGCCGACACCCTGGTCGCCATGCGCGCCG
GGCGGATTCTCGCCTCCGGCCCGCCCCGCGAGATCGTCGACGCCGACCTGGTGCGGGAGCTCTACGGCATCGAGGCCGAG
ATCCTCACCGCGACCTCCGACGGCGCCCCCGTCGTCGTACCGACCGTGAGCGCGCCCCCGGTCGCCGTCTGA

Protein sequence : 
MDIRVEQLTAGYAGHTAVDGVDLTVGSGQVVAIVGPNGCGKSTLLRCVARLHQPRSGKVFAGDADVWQLRQRDAAHRIAL
LPQAPQAPEAVTVAGLVRYGRHPHQGLFRQWSHEDEEAVTRALEATGTTGLADRRLDQLSGGQRQRCWLAMALAQETPIV
LLDEPTSALDIGHAVEVLDLVREVAAQGRTIVMVVHDLAGAARYADTLVAMRAGRILASGPPREIVDADLVRELYGIEAE
ILTATSDGAPVVVPTVSAPPVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-51 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-48 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-48 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-48 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-48 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-48 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-40 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-41 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-41 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-41 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFUL_384 YP_007929253.1 ATPase of griseobactin uptake ABC transporter BAC0164 Protein 1e-51 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFUL_384 YP_007929253.1 ATPase of griseobactin uptake ABC transporter VFG0925 Protein 2e-50 49
SFUL_384 YP_007929253.1 ATPase of griseobactin uptake ABC transporter VFG1042 Protein 1e-51 48