Gene Information

Name : SFUL_3281 (SFUL_3281)
Accession : YP_007932100.1
Strain : Streptomyces fulvissimus DSM 40593
Genome accession: NC_021177
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3726307 - 3728892 bp
Length : 2586 bp
Strand : -
Note : Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase

DNA sequence :
GTGGACGCCGAGCTGACCAACAAGAGCCGGGACGCCATCAACGCGGCCAGCGACCGGGCCGTGAAGGACGGGCACCCCGA
CCTCACCCCCGGGCACCTGCTGCTCGCACTCCTGGCGGGTGAGGACAACGAGAACATCGTCGACCTGCTGGCCGCCGTCG
AGGCCGACCAGGCCGTGGTGCGCGCCGAGACCGAGAAGCTGCTCGGGACCCTGCCCAGCGTCACCGGCTCCACCGTCGCC
CCGCCGCAGCCCAACCGTGAGCTGCTGGCCGTCATCCAGGACGCGGCGCAGCGGGCGAAGGAGCTGGGCGACGAGTACCT
CTCCACCGAGCACCTGCTCATCGGGATCGCCGCGAAGGGCGGGCGCGCCGGTGAGATCCTCGACGGGCAAGGGGCCACGG
CCAAGAAGCTGCTGGCCGCATTCGAGACGAGCAGGGGAGGGCGTCGCGTGACCACACCCGACCCGGAGGGCCAGTACAAG
GCCCTGGAGAAGTTCGGCACCGACTTCACGGCCGCCGCGCGCGAGGGCAAGCTGGACCCGGTCATCGGCCGCGACCAGGA
GATCCGCCGCGTCGTGCAGGTGCTGTCGCGCCGGACGAAGAACAACCCGGTGCTCATCGGTGAGCCCGGCGTCGGCAAGA
CCGCCGTCGTGGAAGGGCTCGCCCAGCGCATCGTCAAGGGCGATGTCCCGGAGAGCCTGAAGAACAAGCGGCTGGTCTCC
CTCGACCTCGGCGCGATGGTCGCGGGCGCGAAGTACCGCGGCGAGTTCGAGGAGCGCCTGAAGACCGTCCTCTCCGAGAT
CAAGGAGAGCGACGGCCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGCGCCGGCGCGGGCGGCGACTCCG
CCATGGACGCGGGCAACATGCTCAAGCCGATGCTGGCCCGCGGTGAGCTCCGCATGGTCGGCGCGACCACGCTGGACGAG
TACCGCGAGCGCATCGAGAAGGACCCCGCCCTGGAGCGCCGCTTCCAGCAGGTGCTGGTCGCCGAGCCGTCCGTCGAGGA
CACCATCGCGATCCTCCGCGGTCTCAAGGGCCGTTACGAGGCCCACCACAAGGTGCAGATCGCGGACTCGGCGCTGGTCG
CCGCGGCCACCCTCTCCGACCGCTACATCACCTCCCGCTTCCTCCCCGACAAGGCCATCGACCTGGTCGACGAGGCCGCC
TCCCGGCTCCGTATGGAGATCGACTCCTCGCCCCTGGAGATCGATGAACTCCAGCGCTCCGTAGACCGGTTGCGCATGGA
GGAGCTGGCCCTGAAGAACGAGTCCGACGCCGCCTCCAAGCAGCGTCTGGAGAAGCTGCGCCGCGACCTCGCCGACAAGG
AGGAGGAGCTGCGCGGCCTCAACGCCCGCTGGGAGAAGGAGAAGCAGGGCCTCAACCGGGTCGGTGAGCTCAAGGAGCGC
CTGGACGAGCTGCGCGGACAGGCCGAACGAGCGCAACGCGACGGCGACTTCGACGCCGCCTCCAAGCTGCTGTACGGGGA
GATCCCGGGCCTGGAGCGGGAGTTGGAGGAGGCCGCCGAGGCGGAGCAGGAAGCCTCCAAGGACACCATGGTCAAGGAGG
AGGTCGGCCCGGACGACATCGCGGACGTCGTCGGCGCCTGGACCGGCATCCCGGCCGGGCGGCTGCTTGAGGGCGAGACC
CAGAAGCTGCTGCGGATGGAGTCCGAGCTCGGCAAGCGGCTGATCGGCCAGAGCGAGGCGGTCCAGGCCGTCTCCGACGC
CGTACGCCGTACGCGCGCCGGGATCGCCGACCCCGACCGGCCCACCGGGTCGTTCCTCTTCCTCGGCCCCACCGGCGTCG
GCAAGACCGAGCTGGCCAAGGCGCTGGCGGACTTCCTCTTCGACGACGAGCGGGCCATGATCCGCATCGACATGAGCGAG
TACGGCGAGAAGCACAGCGTCGCCCGCCTCGTCGGTGCCCCGCCCGGTTACGTCGGCTACGAGGAGGGCGGCCAGCTCAC
CGAGGCCGTCCGCCGCCGCCCGTACAGCGTCGTGCTCCTGGACGAGGTCGAGAAGGCCCACCCCGAGGTCTTCGACATCC
TGCTCCAGGTCCTCGACGACGGCCGGCTCACCGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACCATCCTCGTCCTC
ACCTCCAACCTCGGCAGCCAGTTCCTGATGGACCCCCTGGTCAAGCCCGAGGTCAAGAAGGAGCAGGTGCTGGACGTGGT
GCGGGCCTCCTTCAAGCCGGAGTTCATCAACCGGCTGGACGACCTGGTGGTCTTCTCGGCGCTCTCCGGCGACGAGCTCG
CGCACATCGCGAAGCTCCAGGTCGACCGCCTCGCGGCCCGGCTGGCCGACCGGCGTCTGACCCTCGACGTCACCCCCGAG
GCGCTGGCCTGGCTCGCCGAGGAGGGCAACGATCCGGCGTACGGGGCGCGCCCGCTGCGCCGCCTCATCCAGACGGCGAT
CGGCGACCGGCTCGCCAAGGAGATCCTCTCCGGCGAGATCACGGACGGTGACACCGTGCGGGTGGACCGGGCCGAGGACG
GACTGATCGTCGGCCCGGCCTCGTGA

Protein sequence :
MDAELTNKSRDAINAASDRAVKDGHPDLTPGHLLLALLAGEDNENIVDLLAAVEADQAVVRAETEKLLGTLPSVTGSTVA
PPQPNRELLAVIQDAAQRAKELGDEYLSTEHLLIGIAAKGGRAGEILDGQGATAKKLLAAFETSRGGRRVTTPDPEGQYK
ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKNKRLVS
LDLGAMVAGAKYRGEFEERLKTVLSEIKESDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE
YRERIEKDPALERRFQQVLVAEPSVEDTIAILRGLKGRYEAHHKVQIADSALVAAATLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPLEIDELQRSVDRLRMEELALKNESDAASKQRLEKLRRDLADKEEELRGLNARWEKEKQGLNRVGELKER
LDELRGQAERAQRDGDFDAASKLLYGEIPGLERELEEAAEAEQEASKDTMVKEEVGPDDIADVVGAWTGIPAGRLLEGET
QKLLRMESELGKRLIGQSEAVQAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMSE
YGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILVL
TSNLGSQFLMDPLVKPEVKKEQVLDVVRASFKPEFINRLDDLVVFSALSGDELAHIAKLQVDRLAARLADRRLTLDVTPE
ALAWLAEEGNDPAYGARPLRRLIQTAIGDRLAKEILSGEITDGDTVRVDRAEDGLIVGPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-100 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-98 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 7e-98 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFUL_3281 YP_007932100.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-114 45
SFUL_3281 YP_007932100.1 ATP-dependent chaperone ClpB VFG2084 Protein 7e-105 42