Gene Information

Name : TY21A_03530 (TY21A_03530)
Accession : YP_007925040.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Unknown
Product : glycine betaine/carnitine/choline transport ATP-binding protein opuCA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 779446 - 780393 bp
Length : 948 bp
Strand : +
Note : COG1125 ABC-type proline/glycine betaine transport systems, ATPase components

DNA sequence : 
ATGATTGAATTTAACCATGTCAGTAAAACCTTCGGCGATCAACAGGCTGTTAGCGACCTCAATTTGCACTTTAGCGAAGG
CAGCTTTTCGGTGTTAATTGGCACCTCCGGTTCGGGAAAATCGACCACTCTGAAGATGATTAACCGGCTGGTAGAGCATG
ATAGCGGAACGATCCGTTTTGCCGGTGAAGAGATCCGCAGCCTGCCGGTGCTTGAACTGCGCCGTCGCATGGGCTATGCC
ATTCAGTCTATCGGCCTTTTTCCCCACTGGACGGTGGCGCAAAATATCGCCACCGTACCGCAACTACAAAAGTGGTCGCG
TGCGCGGATTAACGATCGTATTGATGAACTGATGGCATTATTGGGTCTGGAAAGCGCGCTGCGCGATCGCTATCCGCATC
AGCTTTCCGGCGGGCAACAGCAGCGGGTCGGCGTTGCGCGGGCGCTGGCTGCCGATCCGCAGGTATTGCTGATGGACGAG
CCTTTCGGCGCGCTTGATCCGGTAACGCGCGGCGCATTGCAGCAGGAGATGACCCGCATTCATCAGCTACTGGGGCGCAC
CATCGTACTGGTGACGCACGACATCGACGAGGCGCTACGCCTCGCCGACCATCTGGTGCTGATGGACGGGGGCCACGTTA
TCCAACAGGGATCGCCACTTTCTATGCTGACCTCGCCGGAAAATGATTTCGTGCAGGCATTTTTTGGCCGCAGCGAGCTG
GGCGTAAGGCTGCTTTCGTTACGTAGCGTAGGCGATTATGTACGTCGGCATGAACAGCTCAGCGGCGACGCGCTGGTGGA
AGAGATGACGCTACGCGATGCGCTATCGATGTTTGTCGCCCGTCGGTGCGACGTCCTGCCGGTGGCGAATCAGCAGGGCG
AGCCCTGCGGTACGCTCCATTTCCGCGATCTGCTTTCGGAGACGTCCCCCCGTGAAACGACTGTGTGA

Protein sequence : 
MIEFNHVSKTFGDQQAVSDLNLHFSEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGTIRFAGEEIRSLPVLELRRRMGYA
IQSIGLFPHWTVAQNIATVPQLQKWSRARINDRIDELMALLGLESALRDRYPHQLSGGQQQRVGVARALAADPQVLLMDE
PFGALDPVTRGALQQEMTRIHQLLGRTIVLVTHDIDEALRLADHLVLMDGGHVIQQGSPLSMLTSPENDFVQAFFGRSEL
GVRLLSLRSVGDYVRRHEQLSGDALVEEMTLRDALSMFVARRCDVLPVANQQGEPCGTLHFRDLLSETSPRETTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-56 51
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-56 51