Gene Information

Name : TY21A_22015 (TY21A_22015)
Accession : YP_007928563.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Unknown
Product : capsid portal protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4478556 - 4479599 bp
Length : 1044 bp
Strand : +
Note : COG5518 Bacteriophage capsid portal protein

DNA sequence : 
ATGAGTGAACACGACGCCCTGACCAGCACCGCGCCAGTGCAGGAGGCCGAACAGCAGAAGAATACAACTCACGCCGAAGC
GTTCAGCTTTGGCGATCCGATCCCGGTACTGGACCGCCGCGAACTGCTGGACTATGTGGAATGCGTACAGATGGACAGAT
GGTATGAGCCGCCAGTAAGCTTTGACGGGCTGGCGCGAACCTACCGCGCCGCTGTGCATCACAGCTCACCGATAGCGGTT
AAGCGTGACATTCTCAGCAGTACGTACATCCCGCACCGCCTGCTCAGCCAGCAGGCTTTTGCCCGTTTCGTCCAAGATTA
TCTGGTGTTCGGTAACGCCTATCTGGAAAAGCGCACCAACCGGCTCGGCGGCGTTCTCTCACTGGAGCCAGCACTGGCGA
AGTACACACGCCGTGGCTTGGACCTCGACACCTACTGGTTTGTGCAGTACGACCTGACCACGCAGCCCTATGAATTTACA
CAGGGCAACATCTTTCACCTTATGGAGCCGGATATTAACCAAGAGATTTACGGGCTGCCCGGCTATCTCTCCGCCATTCC
GTCAACCCTGCTCAACGAGTCCGCAACGCTGTTCCGCCGGAAGTATTACATCAACGGCAGCCATGCGGGGTTCATCATGT
ATATGACCGATGCAGCACAGAATCAGGAGGACGTGAACAATATCCGCCAGGCAATGAAAAGCGCCAAAGGTCCGGGCAAC
TTCCGCAACCTGTTTATGTACTCGCCCAATGGTAAAAAGGACGGCATCCAGATCATCCCGTTGTCGGAAGTTGCGGCAAA
GGATGAGTTTCTGAACATCAAGAACGTTAGCCGCGATGACATGATGGCAGCGCACCGCGTGCCACCGCAGATGATGGGCA
TCATCCCCAACAATACCGGCGGCTTTGGTGATGTGGAAAAGGCCAGCCGCGTGTTTGTACGAAATGAATTAATACCCCTT
CAAGAAAGGATTAAAGAACTCAATGAATGGTTAGGGGATGAAGTCATTAGATTTGCGAAATATACACTCGACGACATAAG
CTAA

Protein sequence : 
MSEHDALTSTAPVQEAEQQKNTTHAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIAV
KRDILSSTYIPHRLLSQQAFARFVQDYLVFGNAYLEKRTNRLGGVLSLEPALAKYTRRGLDLDTYWFVQYDLTTQPYEFT
QGNIFHLMEPDINQEIYGLPGYLSAIPSTLLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNIRQAMKSAKGPGN
FRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIIPNNTGGFGDVEKASRVFVRNELIPL
QERIKELNEWLGDEVIRFAKYTLDDIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 4e-164 100
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 4e-164 100
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-91 56