Name : TY21A_21745 (TY21A_21745) Accession : YP_007928509.1 Strain : Salmonella enterica Ty21a Genome accession: NC_021176 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4434985 - 4437408 bp Length : 2424 bp Strand : + Note : COG3451 Type IV secretory pathway, VirB4 components DNA sequence : ATGAATCGGTTAGCCAGTTACATCAAACCGCATGCTCAGAGGACGGCATTTACGAAGGCCTGGCTGGCTGAAACAGAACA GCATCTGCGAAATATCACCCGGCCGGAAGGTTTGTTCACTGATTCACTTGTCACCGGGGTTCCCTGGCGGGGACAAAATC GTTCCGTCAGGATGGTGGTATATCGATACCTGCCAGCGAATTACAAAGATGATTCGCCGGTTGCCGCTCTCAACCAGGTT TGTGAGCGCCTGACTTCAGCCTTATCTGCAGCCGGCGTTCTGAGTGTCCGACAGAATGGCGAGCAGATACATCGATGGTT GTTACGTCACTTCAATCCTGAGCCCGACTGGATAGACAAAGATACGCTTTACCGGGAGGCTCGTTATTATGATGATGCAC CTGATTCATTGCCTCTTGGCAATGATTTCACTGAGACGTTGTGGTTTAACCCTCCACGTTCTGATACCCGAAATGGTGTG TGGTGGTTTGATAATGTGGCGCATCGTGCCGTTCCTGTTGAAACATTACGTCGCCCTCCGGGACCCGGTCATCTGACGGG GGAGGTTAAGCGTGGCGACAATATTAATACTCTGATGGATTTATTGCCTGAGGGCACAATGGTATCGCTCACTATTGTGG CGCAGGCTCAGGACACGCTGGAAGCCGGGTTTGACACGCTGGGTAAAAATGCAATAGGGCAGAACACGGAATCCAGGCGG ACCCGTAGTGATGTGGAGCAGGTGAAGAGTTTGCTGGGCATGCGTCACAAACTTTATCGTGCATCGATAACTTTTTTGAT GCGTGCACCTGATGTCAGTGAGCTGAATAAAAAAATACAGCAACTTACCGCTACATTGCTGACTGCGGGGCTTCAGCCCA CGAAACCTGAATACGAAGTGGCGCCCCTGAATGACTATTTGCGAGCGCTTCCTATGTGTTTTAACCCGCAACTGGATAAA AAAAACTGGTATACCCGCCTGACCTGGGTTCAGCATCTGGCTGGATTGCTTCCCGTGACCGGTCGCAGCCAGGGAACCGG ACACCCCGGGTTTAGTTTTTTTAACCGTGGCGGAGAACTGTTGTCTTTTGATCCCTTAAATAGTCTGGACAGAACGCAGA ATGCTCACCTGTTGCTTTTTGGTCCGACCGGGGCGGGTAAATCAGCCACCTTATGTAGTGCGTTATCACAGTTAATGGCC GTTCATCGTCCACGCCTCTTTATTGCCGAAGCCGGCAACAGTTTTGGTTTGCTGGCGGAGTATTTCCGGGGGCTGGGACT GAGCGTAAATGTACTGAGTATCAAACCTGGCTGCGGTATTTCTTTACCGATGTTTGCTGATGCTCATTCCTTAATGCGAG TAGATCCAAAGAAAAACGTGGTTTCTGAGGAAGCTCTACCTGAGCTGGAGCCAGCCAATACCGACAGCGCAGAAGATGAA AGTGAAGAGCGTGACATTCTTGGCGAAATGGAAATTGCAGCCCGGATGATGATCACCGGTGGCGAGAAGCGGGAGGAGGA ACGTCTTACCCGGGCTGACCGCGGTCTTATTCGTGAAGCTATCATGATGGCGGCGGAGAAAACATATCAGGACGGACATC AGATGCTGGCTGAGGATTTACAGGCTGCCCTGTGGAATATCTCACGTGATAATTCCATTGGTGCAAATGGCGAGCTTATG CGGAATCAGTCCCGTCGCGATCGTGCTGCTGAGATGGCAGAAGCCATGGCCATGTTCACTCAGGGATTTGAGGGAGAGTT ATTCAACCGTCCGGGAACACCATGGCCAGAGGCTGATGTCACACTGATCGATTTAGGTCATCTGGCACGTGAAGGCTATG GTGCACAAATGGCGCTGGCGATGGTCTCTTTAATTAACACGATTAACAATATCGCCGAACGTGACCAGGGAACAGCCCGG GATATTGTGGCCGTATTTGATGAAGCCCATATTTCCACGACGAATCCTTTGTTGTCGCCCTATATGACCAAGGTTGTGAA AATGTGGCGAAAACTGGGGGCATGGCTGTGGCTGGCGACACAGAACCTCGAGGATTTTCCTGATATTGCGCAGAAAATGC TGAACATGGCTGAATGGTGGTTGTGCCTGGTTATGCCTCCCGATGAGGTGGAGCAGATTGCCCGTTTCAAAACCCTCAGC GAGGAGCAAAAAGTTATTTTGCGATCAGCCAGTAAGCTCAAAAACTGTTATACCGAGGGCGTCGTTTTATCAAAGCAGGT TGAGGCACTGTTCCGGGTTGTGCCTCCCAGTCTGTATCTCGTCCTGGGGATGACTGAAAAAGAGGAAAAAGCGGAACGTC AGCGGCTGATGCGAGAGTATCAGTGCAGTGAGCTTGAGGCAGCGATCCGGGTGGCCCGCAGGCTGGATGAGGCACGGGGT TTTTGTCCACAAAAAGCGGCCTGA Protein sequence : MNRLASYIKPHAQRTAFTKAWLAETEQHLRNITRPEGLFTDSLVTGVPWRGQNRSVRMVVYRYLPANYKDDSPVAALNQV CERLTSALSAAGVLSVRQNGEQIHRWLLRHFNPEPDWIDKDTLYREARYYDDAPDSLPLGNDFTETLWFNPPRSDTRNGV WWFDNVAHRAVPVETLRRPPGPGHLTGEVKRGDNINTLMDLLPEGTMVSLTIVAQAQDTLEAGFDTLGKNAIGQNTESRR TRSDVEQVKSLLGMRHKLYRASITFLMRAPDVSELNKKIQQLTATLLTAGLQPTKPEYEVAPLNDYLRALPMCFNPQLDK KNWYTRLTWVQHLAGLLPVTGRSQGTGHPGFSFFNRGGELLSFDPLNSLDRTQNAHLLLFGPTGAGKSATLCSALSQLMA VHRPRLFIAEAGNSFGLLAEYFRGLGLSVNVLSIKPGCGISLPMFADAHSLMRVDPKKNVVSEEALPELEPANTDSAEDE SEERDILGEMEIAARMMITGGEKREEERLTRADRGLIREAIMMAAEKTYQDGHQMLAEDLQAALWNISRDNSIGANGELM RNQSRRDRAAEMAEAMAMFTQGFEGELFNRPGTPWPEADVTLIDLGHLAREGYGAQMALAMVSLINTINNIAERDQGTAR DIVAVFDEAHISTTNPLLSPYMTKVVKMWRKLGAWLWLATQNLEDFPDIAQKMLNMAEWWLCLVMPPDEVEQIARFKTLS EEQKVILRSASKLKNCYTEGVVLSKQVEALFRVVPPSLYLVLGMTEKEEKAERQRLMREYQCSELEAAIRVARRLDEARG FCPQKAA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 99 |
PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 68 |
YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 68 |
YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 67 |
api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 67 |
ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 52 |
ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 52 |
unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-174 | 50 |
virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 1e-174 | 50 |
Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 5e-172 | 49 |
RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 1e-172 | 49 |
EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-173 | 49 |