Gene Information

Name : TY21A_21685 (TY21A_21685)
Accession : YP_007928497.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4426768 - 4428858 bp
Length : 2091 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAACCGTTATGTCATGGAGGCGTTATTGAGGCCAGCAGTAGAACTCTATTCAGCTGCGGCTGGCGGGGCTGCCAC
TTTTGTTCTGGTTGTCGCACCATGGTCGATGGCGTTAGCACCACAGGTCAGTTATGTGACTGCAGCCGGTTTTGCCATTT
TCACAACAATCAGAACTCGTCAGGGTTTGCGCATCTTGCGCTATCGACGCAATATCCGTCGGTTACCCCGGTATCAGATG
TCCAGTGAATCCATACCGGTAAGCCGACATTTTTTGTTTCTGGGGAAAGGCTTTATGTGGGAGCAAAAGCATACCCAACG
TTTGCTTGAGACGAAACGGCCGGAAGTTGCTCCCTTTCTGAAACCGTCAGTTTTTTACTCCCTGGCTCGTCAGTTTGAAC
GACGGTATGAGTATACATTCCCTGGGTTATGTAGCCTGACAAGACGAGATTCATTTTTTAATCCGGTACGCCCATTACCC
CCTGTTGGTGGTAATTCGGCGATACATGGTGTCGAGATGGAGGAAGATAATGTTTTGATGAGTCTTACCGAGCGCGTTGG
ACATCTTCTTGTATTAGGAACGACACGAGTTGGTAAGATCCGTCTGGCAGAACTGTTAATTACGCAGGATATTCGCAGAG
GAAATGTCACTATCGTTTTTGACCCCAAAGGTGATGCTGATCTGTTGAAACGAATGTGGGCTGAGACGAGGCGAGCTGGG
CGTAGCGACGAGTTTTATATCTTTCATCTTGGCTGGCCAGATATCAGTGCCCGTTATAATGCAGTCGGCCGTTTTGGACG
CGTATCTGAAGTGGCCTCACGTGTTGCCGGGCAGCTTGGGGGAGAAGGAAATAACGCTGCGTTTAAAGAGTTTGCATGGC
GCTTTGTCAATATCATCGCTCGTGCTCTTGTCGTTCTTGGTTTGCGACCTGATTATTCGCTTATCCTCCGGTACGTAACA
AATATTGCAGAGCTTTATGAGACCTATGCCGAGAAGTTACTGACTCAACAGGCTCCGGAGTTGTGGCTGATGGTTCAAAA
CCAGATGGGGATCCTGACTGAGGATGATTTACCACGTACGATGCAGGGACAGGTTAATGCTATTCGGGTTATGGCCATTG
AAGTGGCATTATCCAGTGAGCAGGGCAAAAAAATATACGATCCCGTACTGGATGGGTTGCGTAGCGCTGTACGTTATGAT
CGAACATATTTCGATAAAATAGTCGCTTCATTGTTACCTCTTCTGGAAAAACTGACCACAGGCAAAACTGCGGCACTATT
ATCTCCTGACTACAGTGATATGAATGATCCGCGCCCATTAATAGACTGGCAGGAAATTATACGGAAAGGCGGTGTTGTTT
ACGTCGGTCTTGATGCTCTTTCAGATTCTGAAGTTGCTTCTGCGGTAGGTAACAGTATGTTTGTCGATCTGGTTTCAACA
GCTGGATATATTTATAAGTTCGGACTGTCTGATGATATGCCCGAAGGGAGTAGCCAGCGGTTACCCATCAGTCTTCACTG
TGATGAATTCAATGAGTTAATGGGAGAAGAATTCATTCCGATGATAAATAAAGGCGGTGGGGCAGGTATTGAAGTTACAG
CCTATACCCAGACCTGGTCAGATATTGAGGCCAAAATTGGTAATGCAGCTAAAGCTGCCCAGGTCACAGGCAATTTCAAT
AATATGATTATGCTTCGTGTGAGAGAGAAAACGACAGCTGAGTTGCTGACAACGCAATTACCTGAAGTTGAAATTTATAC
AAAAACACTGGTTTCCGGTGTGACAGATATATCCAATCCGGATCAGGGGAGTGATTTCACATCCAACGTTCAGGACAGAG
TAAGCAGTACACGTGTTCCTCTTTTATCTCCTGCAGAAGTAATGAATTTACCTAAAGGGCAGGCTTTTGCACTGCTGGAA
GGAGGGCGATTATGGAAGATTCGTATGCCGCTGCCGGCATCCGTTGATGATGAAATGATGCCGGTAAACCTGCAGAGTAT
TGTCACTACAATGCGTAAACACTACCGAACGGGAGACACCTGGTGGTCAGGGAGTGTGCTCCCCGGAGATAATCTGGTGG
ATGCGCTATGA

Protein sequence :
MSNRYVMEALLRPAVELYSAAAGGAATFVLVVAPWSMALAPQVSYVTAAGFAIFTTIRTRQGLRILRYRRNIRRLPRYQM
SSESIPVSRHFLFLGKGFMWEQKHTQRLLETKRPEVAPFLKPSVFYSLARQFERRYEYTFPGLCSLTRRDSFFNPVRPLP
PVGGNSAIHGVEMEEDNVLMSLTERVGHLLVLGTTRVGKIRLAELLITQDIRRGNVTIVFDPKGDADLLKRMWAETRRAG
RSDEFYIFHLGWPDISARYNAVGRFGRVSEVASRVAGQLGGEGNNAAFKEFAWRFVNIIARALVVLGLRPDYSLILRYVT
NIAELYETYAEKLLTQQAPELWLMVQNQMGILTEDDLPRTMQGQVNAIRVMAIEVALSSEQGKKIYDPVLDGLRSAVRYD
RTYFDKIVASLLPLLEKLTTGKTAALLSPDYSDMNDPRPLIDWQEIIRKGGVVYVGLDALSDSEVASAVGNSMFVDLVST
AGYIYKFGLSDDMPEGSSQRLPISLHCDEFNELMGEEFIPMINKGGGAGIEVTAYTQTWSDIEAKIGNAAKAAQVTGNFN
NMIMLRVREKTTAELLTTQLPEVEIYTKTLVSGVTDISNPDQGSDFTSNVQDRVSSTRVPLLSPAEVMNLPKGQAFALLE
GGRLWKIRMPLPASVDDEMMPVNLQSIVTTMRKHYRTGDTWWSGSVLPGDNLVDAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4562 NP_458648.1 hypothetical protein Not tested SPI-7 Protein 0.0 99
t4260 NP_807858.1 hypothetical protein Not tested SPI-7 Protein 0.0 99
YE3493 YP_001007651.1 TraG-family protein Not tested YAPI Protein 0.0 72
YpsIP31758_3718 YP_001402672.1 hypothetical protein Not tested YAPI Protein 0.0 72
api27 CAF28501.1 hypothetical protein Not tested YAPI Protein 0.0 72
PMI2588 YP_002152307.1 plasmid transfer protein Not tested Not named Protein 0.0 72
ORF C65 AAN62159.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 62
ORF SG68 AAN62290.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 62
traG CAI36113.1 putative TraG family conjugative protein Not tested PPHGI-1 Protein 0.0 60
EXA47 ABD94656.1 TraG/TraD family protein Not tested ExoU island A Protein 1e-179 58
unnamed ABR13375.1 hypothetical protein Not tested PAGI-5 Protein 2e-180 58
RL047 AAP84173.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-179 58
Pmu_03190 YP_005176218.1 conjugal transfer protein TraD Not tested ICEPmu1 Protein 9e-179 57
traD AAW83057.1 TraD Not tested GGI Protein 1e-140 49