Gene Information

Name : TY21A_21625 (TY21A_21625)
Accession : YP_007928485.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : prepilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4416644 - 4417189 bp
Length : 546 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGGCAGATGCCGGTGCCACTGCACTGTTTATTCTGGTGATCATTGGGGTGATAGCCGCGGCGGTCTGGTCGATGTG
GGGTAAAAAGGATGCGGGTACGGAGCTGACAAACTATCAGACCCTGGCCACGAATACCATTGGCATGATGAAAGGCGTTG
ACGGTTATGCTTTTACCAGTGGCGCTAAAATGACCGACACGTTAATTCAGGCCGGGGCGGCAAAAGGGATGACGGTCAGT
GGAGACCCTGCTTCCGGTTCCGCGACACTGTGGAACTCATGGGGTGGCCAGATTGTGGTGGCGCCGGATACAGCGGGGGG
AACCGGATTTAATAATGGGTTCACCATTACCACAAACAAAGTTCCGCAATCTGCCTGCGTATCCATTTCAACAGGTATGA
GCCGTTCAGGCGGCACGTCCGGTATTAAAATAAACGGCAATAACCACACCGATGCGAAAGTAACGGCAGAAATCGCGAGC
AGTGAATGCACTGCAGATAATGGCCGGACCGGTACCAATACGCTGGTTTTTAACTACAACGGCTGA

Protein sequence : 
MSADAGATALFILVIIGVIAAAVWSMWGKKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQAGAAKGMTVS
GDPASGSATLWNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSISTGMSRSGGTSGIKINGNNHTDAKVTAEIAS
SECTADNGRTGTNTLVFNYNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilS AAC98887.1 PilS Virulence SPI-7 Protein 8e-56 100
pilS NP_458635.1 prepilin Virulence SPI-7 Protein 8e-56 100
pilS NP_807846.1 prepilin Virulence SPI-7 Protein 8e-56 100
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 5e-22 50
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 9e-23 49
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 6e-23 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_21625 YP_007928485.1 prepilin VFG2315 Protein 1e-22 50