|
Name : TY21A_21615 (TY21A_21615) Accession : YP_007928483.1 Strain : Salmonella enterica Ty21a Genome accession: NC_021176 Putative virulence/resistance : Virulence Product : nucleotide-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 4413757 - 4415472 bp Length : 1716 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGTCTGAACACAACGATGCGGTTCTGCTTTACCACAACCCGGACACCACGATCCTCGAGCTGCTGGTTGACAGCCAGCG GCGTACCGACGTGGCGGTGCAGCAGAAGGTAATGTCTCTGATGGAGGAAAACCCCGGTGTCACAATGAGGCTGGTAACCC GTTCAGAGTTGCTCAGGTACAGTGAAATGGCTCGCCAGCAGTCAGAGAAGGGAGAAAAAGGACTTCGCCTTGAGGACATC AAAAAAGAGGTCAGCAGCCGTCAGGGCGATGTTCTCAACTATTTTATGGTCGCGAAAGATATCGGCGCGTCTGATATTCA CGGTACCACCCGGCCAGGACTGACGCGCATCGAGATGCGTGTGCACGGTGAACTGGAGACCGTTTCGGAACTGGCTGAAG AAGACGGAAAAGCACAGGCGGCCACTATCATCCTTTCCATGTGTGATGTGACCGAACCCCAGTTCTACGCCGGCCGAAAA CAGGATGGTCGTGTGGCTGCAAAGTTTCTGCGAAAGGTGGGGTTATTTGGCGCCCGTTACAGCCACACCCCGACAGCAGA TGGCCTTCACTTTGTGATGCGCGTGATCCCGGATGATGGTGATGTGGTTCCCACGCTCGAAAAACTCGGTTTTCTGCCGA AACAAATCCGCCTGATAAAGCGCACTTTGCGCCTGCCAGAAGGGATGATTATTTTGTCCGGCCCGACCGGAGCCGGGAAA TCCACCACCCTGCGTGCCTGCAGCGACCTCTATCTGAAGCGTACCCGGTATAAAAAGCGCCTACTGACGGTTGAAGATCC GCCGGAGGGACGCATCGTTGGGGCAATACAGACTTCTATTATCTGTGACAAAGCCGATGAGGCGGAAGTCAGGCTGGCCT GGCAGCGGGTGCTGACCTCAGCGTTACGTCTCGATCCGGATGCCATTTTACCTGGTGAACTTCGTGACCTTATCTCCATT CTGGCCGGGATTTTTGCCGCTCAGACCGGCCATCTGGTGCTGAGTACCCTGCATTCAAACTCGGCCTTTTCCATCCCTGA GCGAATGATAACGATGGGTGCAAATGCCGGACTGGTGGCAGATGCCCAGTTGTTGGTCGGGCTTATCAGCCAGCGTCTGG TTCAGGTGCTGTGTCCCGAGTGCCGTATTCCCTGGTCGGTTAAAAAAGAACATCTCACCACCGAAGAACGTGAATATCTG GAAAAGTACTGTTCAGTGGAGGGGGTTTGTCAGCCCGAAAATCTTCATTTCAGAAATGAGGAGGGGTGCCCGACCTGCCG GAAGGCGGTCATTATCGGTGGCAAACAGGTGGCAACAGTCGGTAAGGGGGTGGCCGGACGCAGTGTGGTGGCGGAGGTGG TTCGCACGGATTCTACGCTTTTCAGGCTGTTATTACAGCAGGGTAAGGAAGCTGCAAAAGCTTACTGGATCCGTGAAATG GGGGGGATTACCCGTCGCATTCATCTGCTTCACAAACTGAATGACGGGCTGGTTGACCCACTGGATGCCGATTTGATTAT TCCTCTTGATGAGGATGAGGTGATGCAGGTGGTAAGTGATCAGGTTGCATCGTCGAGTGACATTGATACGTCGCTGATTG AACGCCTTGCCATGGTAATTGCAGCCAGCGTCAGAGAGGGGATGAAGCAGGGTGTTGAGGAAGCCATTAAAGAAGGCGTT GCTGCCGGGATGGCTGCGCTGAAGGAGGTTGCATGA Protein sequence : MSEHNDAVLLYHNPDTTILELLVDSQRRTDVAVQQKVMSLMEENPGVTMRLVTRSELLRYSEMARQQSEKGEKGLRLEDI KKEVSSRQGDVLNYFMVAKDIGASDIHGTTRPGLTRIEMRVHGELETVSELAEEDGKAQAATIILSMCDVTEPQFYAGRK QDGRVAAKFLRKVGLFGARYSHTPTADGLHFVMRVIPDDGDVVPTLEKLGFLPKQIRLIKRTLRLPEGMIILSGPTGAGK STTLRACSDLYLKRTRYKKRLLTVEDPPEGRIVGAIQTSIICDKADEAEVRLAWQRVLTSALRLDPDAILPGELRDLISI LAGIFAAQTGHLVLSTLHSNSAFSIPERMITMGANAGLVADAQLLVGLISQRLVQVLCPECRIPWSVKKEHLTTEEREYL EKYCSVEGVCQPENLHFRNEEGCPTCRKAVIIGGKQVATVGKGVAGRSVVAEVVRTDSTLFRLLLQQGKEAAKAYWIREM GGITRRIHLLHKLNDGLVDPLDADLIIPLDEDEVMQVVSDQVASSSDIDTSLIERLAMVIAASVREGMKQGVEEAIKEGV AAGMAALKEVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilQ | NP_458633.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 0.0 | 99 |
| pilQ | NP_807844.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 0.0 | 99 |
| pilQ | AAF14817.2 | PilQ | Virulence | SPI-7 | Protein | 0.0 | 99 |
| YpsIP31758_3731 | YP_001402685.1 | type IV secretion system protein | Virulence | YAPI | Protein | 9e-128 | 55 |
| pilQ | CAF28490.1 | putative ATP binding protein | Virulence | YAPI | Protein | 2e-125 | 55 |
| YE3502 | YP_001007663.1 | putative type IV pilus protein | Virulence | YAPI | Protein | 5e-125 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TY21A_21615 | YP_007928483.1 | nucleotide-binding protein | VFG2313 | Protein | 2e-125 | 55 |
