Gene Information

Name : TY21A_21165 (TY21A_21165)
Accession : YP_007928404.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : putative type-I secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4310040 - 4310954 bp
Length : 915 bp
Strand : +
Note : COG1538 Outer membrane protein

DNA sequence : 
GTGACAACCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGAT
GCTGGAAACTTTTTCGCTACTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATG
CATTAAATACCAGAAGTATTATGTATCAGTCGATGCTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAAT
TTATCACCAGATCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACT
TATGGACATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCTGCGACCGAAGATATTAATG
CCGCAAAATCATCCTATTTTCCGACTGTAGATCTCGTTTCCAGCTATGTACAGAATAATCCGAGCGGTAGTGCCAAAAAA
AGTGATTATGAAGATGAATTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTTAGAAATGCAGCCCAGGA
AAGAAAAATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTCTTGATTAAAACTCGTTATAACATTGATT
CACAACTTTCAAAATACACCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACT
GAATTATATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGC
ATATGTAAGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGG
ATTATTTAAAAAGTGAGTTAAATGTAATGAAATGA

Protein sequence : 
MTTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLN
LSPDQIQSDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKK
SDYEDEFKTGINVSFNIFNGFRNAAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVAERSHTNALQLT
ELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKSELNVMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC4138 YP_219125.1 ABC transporter outer membrane protein Not tested SPI-4 Protein 2e-134 98
STM4259 NP_463124.1 ABC exporter outer membrane component Not tested SPI-4 Protein 2e-134 98
siiC CAE11795.1 putative type-I secretion protein, putative outer membrane component Virulence SPI-4 Protein 2e-134 98
spi4_C AAC26641.1 ABC exporter outer membrane component homolog Virulence SPI-4 Protein 3e-134 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_21165 YP_007928404.1 putative type-I secretion protein VFG0579 Protein 1e-134 98