Gene Information

Name : TY21A_21160 (TY21A_21160)
Accession : YP_007928403.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : putative integral membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4308269 - 4309657 bp
Length : 1389 bp
Strand : +
Note : COG0840 Methyl-accepting chemotaxis protein

DNA sequence :
GTGAAATATATAAATCATTATCGCTATTTGTTTGTCTGTTTTTTCCTTGCCATACTCCCTTTTTTCGCTTTATCTTTTCC
CGGTATAAGAGAGTATGTTTTTGATAATTTTATGGTTTCTGCAATTTACAATGGAGTCATTATTGCCATTTATATTACAG
GTTCTTTGTGTGCATTATTCACTATTCTTAAAAATATTTCAGCAAAAGACATATTAATAGCTCAGGACGCCAGTAGAAAA
AATAGCATTCTTTCTAACCTCAATCAGGTTTTGTTTGCCGGGGAACCCAAACAGTGTGATTTCAATTTACTGATGGAATT
AGATGACAATGTGTCTACCGCCCGTAACCAACGATTGTCATTTATTATGAGCTGTAGCAATGTGTCGACGCTTGTTGGCC
TGTTGGGGACGTTTGCGGGTCTGTCTATTACGATTGGTTCAATCGGGAACTTATTGAGCTCGCCATCAGATGTTGGCGGT
GATAATGCAAGTAATACACTCAATATGATTGTGACAATGGTAGCGTCGCTTTCTGAACCATTGAAAGGGATGAATACCGC
ATTTGTATCTTCTATCTATGGTGTTGTTTGCGCCATACTCCTGACCTCACAAAGTGTTTTTGTTCGCAGCTCCTATTCCC
TTGTTTCTACAGAGATCAAAAAATTAAAAATCATAAGTAACAGATCCAATAATAAACAACGAAGCCTGCGGGTTGAATCA
GAGACGCTTGTAGAATTTAAAGAGTTGTTTAAAGCGTTTTTTGATAACTACCTGACAGTTGAAAACTTACGGACGCAGGA
TGAAGAAAAGAAACGAGTGATGCTATCAGATAGCTTTGTCACTTTGCAAAACCGACTATTGGATAACTCAGCAAAACTGG
AACAACTTTCTACGCTGATTGATGGTTATCTGGTAAGCAATAACGAAAATACCAAAAAATTAGTTGACGGTGTAATAACA
ATTACCTCTCGTTTATCTGAAGGTAATACCCTGCTTGCTGATAATAATGCACGACTGGAGGCAATGAGTACAATACAAAA
TATTATAGACAAAAAGAATGATTCAATAATGGCATCAGTTGATAAATGTTATCAGGAATCTTTTTCACATGGTAAGACCA
TAAACGATATTGCCGCTGGCAGTGCCGATATTTCTCATACTCTCGATGGGCTGAGAAAAGAAATGGATGAGGATATGAAT
AATGTTCATTTAGCGCTATCCGATCTATCGGCTACTGATAAAAAGATTATTGCCAATACTAAAGAGATTAGTGCTGAAAT
GGTTAGCTATCGTGATACCTATATGCCATTAATGGAAAAAATAACATCTATGCATCAGGAAATAGTAAAGCAACGTTTGT
TAAACAAGGAGGAAAAAAATGAAGATTAA

Protein sequence :
MKYINHYRYLFVCFFLAILPFFALSFPGIREYVFDNFMVSAIYNGVIIAIYITGSLCALFTILKNISAKDILIAQDASRK
NSILSNLNQVLFAGEPKQCDFNLLMELDDNVSTARNQRLSFIMSCSNVSTLVGLLGTFAGLSITIGSIGNLLSSPSDVGG
DNASNTLNMIVTMVASLSEPLKGMNTAFVSSIYGVVCAILLTSQSVFVRSSYSLVSTEIKKLKIISNRSNNKQRSLRVES
ETLVEFKELFKAFFDNYLTVENLRTQDEEKKRVMLSDSFVTLQNRLLDNSAKLEQLSTLIDGYLVSNNENTKKLVDGVIT
ITSRLSEGNTLLADNNARLEAMSTIQNIIDKKNDSIMASVDKCYQESFSHGKTINDIAAGSADISHTLDGLRKEMDEDMN
NVHLALSDLSATDKKIIANTKEISAEMVSYRDTYMPLMEKITSMHQEIVKQRLLNKEEKNED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4453 NP_458555.1 putative integral membrane protein Not tested SPI-4 Protein 0.0 100
mac YP_219124.1 methyl-accepting chemotaxis protein Not tested SPI-4 Protein 0.0 99
siiB CAE11794.1 putative inner membrane protein Virulence SPI-4 Protein 0.0 98
STM4258 NP_463123.1 methyl-accepting chemotaxis protein Not tested SPI-4 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_21160 YP_007928403.1 putative integral membrane protein VFG0578 Protein 0.0 98