Gene Information

Name : TY21A_20210 (TY21A_20210)
Accession : YP_007928215.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : putative ribokinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4112736 - 4113950 bp
Length : 1215 bp
Strand : -
Note : COG1349 Transcriptional regulators of sugar metabolism

DNA sequence :
ATGAAATTTGAACGCCATCATAGAATATTGAAGGAACTCAGTATTTCGGGAGTTGTAAAAGTTTCAAATCTGGCGAAAAG
TCTCAAGGTAACAAAGGAAACTATTCGTTCAGATCTCAATGAACTTGCCGGACAGGGATATCTTACTCGCTGTCATGGTG
GTGCATTTATTACCCTTGATTCTCTTGATAACGTCGCAAAAAATGAAATTGCTTATGTGCTGGAAAAATATGAATCAGCG
CAGAAAATAAAAAAAGGTCTCTCTGCCATGAAAAATAATGTATGTGTTATTGGCTCGTTCAATGTTGATATTATCAGTTA
TCTACCGAGATTACCCTCAACGGGAGAATCATTGCTGGCCGATAAATTTATTTTTTCACCCGGCGGTAAGGGATGTAATC
AGGCATTAGCAGCAAGCTATGCCGATTCTGATGTGCATTTTATTACTAAAGTCGGCTCAGATCATTTTAGCGATTACGCC
ATTAATTTTATAAACTCATCAAAAATCCATAAAAGTGTTATCTACCAGACCAAAGAAACACAAACAGGTACAGCAACCAT
CATGGTGAATGGTGATACCGGAGATAATGTCATCGCTATCTACCCTGGCGCCAACATGACAATTTCCCCTGATGAAATCA
CCATTCAAAAAGAAGCCATTGTTCATTCAGATATTGTTCTTGTCCAACTGGAGACGAATTACGAAGCGCTGCAGCAAACA
ATTCGTCTCGCACAAAAAAATGACATACCGGTCATCATCAATCCAGCGCCGTACAATGACATGGTTAACACCATCATTGA
TAACATTGACTATATTACGCCAAATGAAACGGAAGCCGGCCTGCTGGCCAATATGGCGGTTAATGATATCGAATCAGCCA
AATGCGCGGCCAAAATTATTCACCAGAAAGGCGTCAAAAATACCATTATTACATTAGGTAGCAAAGGTTCGCTTGCTTAT
GACGGCACACAATTCATCTATTCCCCGGCATTTCCGGCAGTTGTAAAAAATACGGCGGGAGCGGGTGACGCTTTCAATGG
CGCCCTCTCATCTGGCCTTGCAAAAGGAAAGTCACTGGCATCCGCATTGTGCTACGCCAGCGCATTTGCCTCACTTGCGG
TTGAAACGCCTAATGCCTCTGATATGCCGGAAAACGACTCCGTTCTTCATCGTATTCAGGGTTCACATTACAAACAAACT
ATCTCTACTCACTAA

Protein sequence :
MKFERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLDNVAKNEIAYVLEKYESA
QKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYA
INFINSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQT
IRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKIIHQKGVKNTIITLGSKGSLAY
DGTQFIYSPAFPAVVKNTAGAGDAFNGALSSGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHRIQGSHYKQT
ISTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 8e-156 81
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 3e-71 48
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 2e-71 48
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 2e-71 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_20210 YP_007928215.1 putative ribokinase VFG0483 Protein 9e-72 48