Gene Information

Name : TY21A_17300 (TY21A_17300)
Accession : YP_007927672.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Unknown
Product : major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3516382 - 3517440 bp
Length : 1059 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGAAGAATACCCGCTTTGCTTTTAACGCTTACCTGCAGCAGCTGGCGCGTCTGAACGGTGTTGCAGTTGAAGAACT
GTCCAGCAAGTTCACCGTCGAACCGTCCGTGCAGCAGACGCTGGAAGACCAGATCCAGCAGTCCGCCGCTTTCCTGACAC
TGATTAACGTCACGCCAGTGACTGAGCAGTCCGGTCAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCGGAACCACT
GATACCACCGCGAAAGAGCGTGAACCTGTCGATCCGACGCTGATGGTTGATGTGGAATATAAATGCGAGCAGACTAACTT
TGACACGGTGCTGACCTACGCGAAGCTGGACCTGTGGGCGAAGTTTCAGGATTTCCAGGTGCGTATCCGTGACGCCATCG
TGAAACGTCAGGCACTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGTGCGAAAACCTCCAACCGTAGCGAAAAC
CCGCTGCTGCAGGATGTGAATAAAGGCTGGCTGCAGAAAATCCGTGAGGATGCACCGGATCACGTCATGGGCAGCACCAC
CACGGGCGGTGAAACTACACCGGGTGCGGTGAAAGTCGGGAAAGGTGGCGAATATGCCAACCTAGACGCCGTAGTGATGG
ATGCCGTCAATGAGCTTATCGACGTGGTTTACCAGGACGATGACGATCTGGTGGTTATTTGCGGGCGTGAACTGCTGTCT
GACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGAAAACAGTGAAAAACTGGCTGCCGATATGATCATCAGTCAGAAACG
CATGGGTGGCCTGCAGGCCGTGCGTGCGCCGTTCTTCCCGCCGAATGCGCTGCTAATCACCCGTCTGGATAACCTGTCCA
TCTACTGGCAGGAAGGCACCCGCCGCCGTTCAGTTATCGACAACCCGAAACGCGACCGGATTGAAAACTTTGAATCCGTT
AACGAAGCCTATGTGGTTGAGGACTACCGCTGCGCCGCACTGGTGGAAAACATCCAGATTGGCGATTTCAGCGCCGCTGC
AGCAGAAGCCGGAGCGTAA

Protein sequence : 
MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTT
DTTAKEREPVDPTLMVDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDVVYQDDDDLVVICGRELLS
DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEGTRRRSVIDNPKRDRIENFESV
NEAYVVEDYRCAALVENIQIGDFSAAAAEAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 2e-129 92
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 2e-129 92
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 7e-72 53