Gene Information

Name : TY21A_17295 (TY21A_17295)
Accession : YP_007927671.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Unknown
Product : putative capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3515532 - 3516365 bp
Length : 834 bp
Strand : +
Note : -

DNA sequence :
ATGACAGTGAAAGCAAAGCGTTTTCGCATCGGGGTGGAAGGTGCCACTACCGACGGACGCGAAATCCAGCGTGAATGGCT
GGAACAGATGGCAGCCAGCTACAATCCGGCGGTGTATACCGCGCTGATTAACCTTGAGCACATCAAGTCTTATCTGCCGG
ACAGCACCTTTAACCGCTACGGCAAGGTGACGGCGCTGTTTGCTGAAGAAATCACGGAAGGTCCGCTGGCGGGCAAGATG
GCACTGTATGCCGACGTTGAGCCAACGGAGTCCCTGGTGGAGCTGGTGAAAAAAGGCCAGAAATTATTCACCTCTATGGA
AGTCAGCCCGAAGTTCGCTGATACGGGCAAAGCCTACCTGGTCGGCCTGGCTGCCACTGATGACCCTGCCAGTCTGGGCA
CTGAAATGCTGACATTCAGCGCCAGTGCAGCCCATAACCCGCTGGCAAACCGCAAGCAGAATCCCGCCAATCTCTTTACC
GCCGCAGAGGAAACGGTGATCGAACTGGAAGAAATCCAGGAGGACAAGCTGTCCCTGTTTGCCCGCGTCACGGCACTGTT
CACCAAAAAAGAGCAGTCCGACGATGCCCGGTTCTCTGATGTGCATAAGGCCGTGGAGTTGGTCGCCACTGAGCAGCAAA
ACCTGAGCGCACGCACCGAAAAATCCCTGTCTGAGCAGGAAGAACGTCTGTCTGAGCTGGAGACTGCCCTGCAGGCACAG
CAGACAGCCTTTAACGAACTGGTGAATAAGCTGAGTCATGAAGACAGCCGCCAGGACTACCGCCAGCGTGCAACAGGCGG
TAACGCCCCCGCTGACACTCTGACCAATTGCTGA

Protein sequence :
MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALINLEHIKSYLPDSTFNRYGKVTALFAEEITEGPLAGKM
ALYADVEPTESLVELVKKGQKLFTSMEVSPKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFT
AAEETVIELEEIQEDKLSLFARVTALFTKKEQSDDARFSDVHKAVELVATEQQNLSARTEKSLSEQEERLSELETALQAQ
QTAFNELVNKLSHEDSRQDYRQRATGGNAPADTLTNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 8e-99 85
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 8e-99 85
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 2e-42 47