Gene Information

Name : xerD (TY21A_14975)
Accession : YP_007927231.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3052442 - 3053338 bp
Length : 897 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGGAACAGGATTTAGCGCGTATTGAGCAGTTTCTGGATGCCCTGTGGCTGGAACGAAATCTGGCGGAAAATACATTAAG
CGCGTATCGTCGCGATTTATCGATGGTCGTTGCGTGGTTGCATCATCGCGGAAAAACGCTTGCGACGGCGCAGGCTGATG
ATTTACAAACGCTATTGGCTGAACGGGTGGAGGGCGGATACAAAGCGACCAGCTCCGCACGCCTGTTAAGCGCTATGCGG
CGCTTTTTCCAGCATCTGTACCGTGAAAAGTATCGTGAGGATGATCCGAGCGCACAGTTGGCCTCGCCTAAGCTTCCGCA
GCGTTTACCGAAAGACCTTAGCGAGGCGCAGGTTGAACGGCTCTTGCAGGCGCCGCTTATTGATCAACCTTTGGAGTTGC
GCGATAAAGCTATGTTGGAAGTGCTGTATGCCACCGGTTTGCGCGTGTCGGAACTGGTGGGGCTGACAATGAGCGATATC
AGTCTGCGGCAGGGCGTGGTGCGGGTTATCGGTAAAGGCAATAAAGAGCGGTTGGTGCCGTTAGGCGAAGAGGCGGTATA
TTGGCTGGAAACGTATCTGGAGCATGGGCGTCCCTGGTTACTCAATGGCGTATCGATTGACGTATTATTCCCCAGTCAGC
GTGCGCAGCAGATGACGCGACAGACCTTCTGGCACCGTATTAAACATTATGCGGTACTGGCTGGAATTGATAGCGAAAAA
CTATCGCCGCATGTTTTACGTCACGCTTTCGCCACGCATTTGCTGAATCACGGCGCCGACTTGCGCGTTGTACAAATGCT
ACTTGGGCATAGCGATCTTTCGACGACACAAATTTATACGCATGTCGCAACGGAGCGTTTGCGTCAACTTCATCAACAGC
ACCATCCGCGGGCATGA

Protein sequence :
MEQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAERVEGGYKATSSARLLSAMR
RFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-62 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-62 54