Gene Information

Name : TY21A_14110 (TY21A_14110)
Accession : YP_007927064.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein SpaO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2872192 - 2873103 bp
Length : 912 bp
Strand : -
Note : COG1886 Flagellar motor switch/type III secretory pathway protein

DNA sequence :
ATGTCATTGCGTGTGAGACAGATTGATCGTCGCGAATGGCTATTGGCGCAAACCGCGACAGAATGCCAGCGCCATGGCCG
GGAAGCGACGCTGGAATATCCGACGCGACAGGGAATGTGGGTTCGGTTGAGCGATGCAGAAAAACGGTGGTCGGCCTGGA
TTAAACCTGGGGGCTGGCTTGAGCATGTCTCTCCCGCTCTGGCGGGGGCGGCGGTTTCTGCCGGTGCTGAGCACCTGGTC
GTTCCCTGGCTTGCTGCAACAGAGCGACCGTTTGAGTTGCCCGTGCCGCATTTGTCCTGTCGGCGTTTATGCGTAGAGAA
CCCCGTACCGGGAAGCGCGCTGCCGGAAGGGAAATTGTTGCACATTATGAGCGATCGGGGCGGCCTGTGGTTTGAGCATC
TTCCTGAACTGCCTGCAGTCGGGGGCGGCAGGCCGAAAATGCTGCGTTGGCCGTTGCGCTTTGTAATCGGTAGCAGTGAT
ACGCAGCGTTCTTTGCTGGGCCGAATCGGGATCGGAGATGTACTCCTGATTCGTACTTCCCGTGCGGAAGTTTATTGCTA
CGCGAAAAAGTTAGGTCATTTCAACCGTGTTGAAGGGGGAATTATTGTGGAAACGTTAGATATTCAACATATCGAAGAAG
AAAATAATACAACTGAAACTGCAGAAACTCTGCCTGGCTTGAATCAATTGCCCGTCAAACTGGAATTTGTTTTGTATCGT
AAGAACGTTACCCTCGCCGAACTCGAAGCCATGGGGCAGCAACAGCTATTATCACTGCCGACCAATGTTGAACTTAACGT
TGAAATTATGGCGAATGGTGTTTTGCTTGGTAATGGCGAACTGGTACAGATGAATGACACCTTAGGCGTTGAGATCCATG
AATGGCTGAGCGAGTCTGGTAATGGGGAATGA

Protein sequence :
MSLRVRQIDRREWLLAQTATECQRHGREATLEYPTRQGMWVRLSDAEKRWSAWIKPGGWLEHVSPALAGAAVSAGAEHLV
VPWLAATERPFELPVPHLSCRRLCVENPVPGSALPEGKLLHIMSDRGGLWFEHLPELPAVGGGRPKMLRWPLRFVIGSSD
TQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYR
KNVTLAELEAMGQQQLLSLPTNVELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESGNGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaO NP_806494.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 4e-128 100
spaO NP_457285.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 4e-128 100
spaO YP_217810.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 2e-125 99
spaO NP_461812.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 2e-127 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_14110 YP_007927064.1 surface presentation of antigens protein SpaO VFG0552 Protein 9e-128 99