Gene Information

Name : TY21A_13970 (TY21A_13970)
Accession : YP_007927036.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : iron transport protein, ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2846033 - 2846854 bp
Length : 822 bp
Strand : +
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGAGTCAATCTGCGATTACCGTTGATCAAGTCACGGTGACGTATCGCAACGGTCATACCGCCCTACGGGACGCTACTTT
TCAGGTGCCTGGCGGTTCAATCGCCGCGCTGGTAGGCGTAAATGGTTCCGGTAAGTCTACGTTATTTAAAGCGTTAATGG
GCTTTGTGCATCTTGCGCGGGGCGATATCACTATCCTGCAACAGTCAGTCAACCAGGCGCTGAAAAAAAACCTCATTGCT
TATGTTCCACAATCGGAAGAAGTGGACTGGTCATTTCCGGTACTGGTAGAAGATGTGGTGATGATGGGACGCTACGGTCA
TATGGGCTGGCTACGCCGTCCCACAGCGCATGATCACGCCTGTGTTGACGCCGCGCTGGCGCGGGTGGATATGCAGGAAT
ATCGTCACAGGCAGATTGGCGAGCTGTCCGGCGGGCAGAAAAAACGTGTGTTTCTTGCCAGGGCCATCGCTCAGGATGGA
CAGGTAATCCTGCTGGATGAACCTTTTACCGGCGTGGATGTAAAAACCGAAGCGCGAATCATCGATCTACTGCGGGAACT
GCGCGATGAAGGCCGCACGATGCTGGTCTCAACGCATAATCTCGGCTCCGTCACCGAATTTTGCGACTATACGGTAATGA
TTAAAGGAACCGTACTGGCCAGCGGCCCTACCGAAACCACGTTTACCGCCGCGAATCTGGAACTGGCGTTTAGCGGCGTT
CTACGTCATATCGCGCTAAGCGGAGGTGAAGAGCACATCATCACCGATGACGAGCGCCCCTTTATTTCCCGACGCGTGGC
CAGCGGAGGAAAATCGTCATGA

Protein sequence : 
MSQSAITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLARGDITILQQSVNQALKKNLIA
YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLELAFSGV
LRHIALSGGEEHIITDDERPFISRRVASGGKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-128 100
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-128 100
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-126 99
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-126 99
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-126 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_13970 YP_007927036.1 iron transport protein, ATP-binding component BAC0350 Protein 1e-126 99
TY21A_13970 YP_007927036.1 iron transport protein, ATP-binding component BAC0440 Protein 1e-80 63
TY21A_13970 YP_007927036.1 iron transport protein, ATP-binding component BAC0400 Protein 7e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_13970 YP_007927036.1 iron transport protein, ATP-binding component VFG0526 Protein 1e-126 99