Gene Information

Name : TY21A_12515 (TY21A_12515)
Accession : YP_007926764.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Resistance
Product : transcriptional regulator PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2538122 - 2538811 bp
Length : 690 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGGCGAGACGTATTCTGGTCGTAGAAGATGAGGCGCCGATCCGTGAAATGGTGTGCTTCGTGCTCGAACAAAATGGCTT
TCAGCCCGTAGAAGCCGAAGATTATGACAGTGCGGTGAATAAACTTAATGAACCCTGGCCGGATCTCATCCTTCTTGACT
GGATGTTGCCCGGCGGGTCAGGGTTACAGTTTATTAAACATCTCAAACGTGAGGCCATGACCCGGGATATTCCTGTGGTT
ATGCTGACCGCGAGAGGTGAGGAAGAAGATCGTGTGCGCGGGCTGGAAACCGGCGCTGACGATTACATTACCAAGCCGTT
TTCCCCCAAGGAGTTGGTGGCGCGCATTAAAGCCGTTATGCGGCGTATCTCGCCGATGGCGGTCGAAGAGGTGATCGAGA
TGCAGGGACTGAGCCTTGATCCTGGCTCTCACCGCGTGATGACCGGCGACAGCCCGCTGGATATGGGGCCGACCGAATTT
AAATTACTCCATTTCTTTATGACGCACCCGGAACGGGTTTACAGCCGCGAACAGCTGCTCAATCATGTCTGGGGCACCAA
TGTGTACGTTGAAGACCGGACGGTCGACGTGCATATTCGCCGTTTGCGTAAGGCGCTGGAGCACAGCGGCCACGACCGGA
TGGTGCAAACGGTACGCGGGACAGGGTATCGTTTTTCGACCCGCTTTTAA

Protein sequence :
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNKLNEPWPDLILLDWMLPGGSGLQFIKHLKREAMTRDIPVV
MLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPGSHRVMTGDSPLDMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEHSGHDRMVQTVRGTGYRFSTRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB HE999704.1.gene2815. Protein 2e-39 43
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB CP001918.1.gene5135. Protein 1e-24 42
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB CP001918.1.gene3444. Protein 9e-34 41
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB CP000647.1.gene2531. Protein 2e-34 41
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB BAC0039 Protein 1e-33 41
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB BAC0596 Protein 5e-34 41
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB CP000034.1.gene2186. Protein 1e-33 41
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB NC_002695.1.916589.p Protein 1e-33 41
TY21A_12515 YP_007926764.1 transcriptional regulator PhoB CP001138.1.gene2239. Protein 5e-34 41