Gene Information

Name : TY21A_00115 (TY21A_00115)
Accession : YP_007924385.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : fimbrial chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25116 - 25802 bp
Length : 687 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGAAAAAAAACGTACCGATTTTCCTTCGATTATTGCTACTGCTGTCGGCGGCCGGCCTGTCGTTTGCCGTGCAGGCGGG
AGGCATTGCGCTGGGCGCGACCAGGGTGATTTATCCGCAGGGAAGTAAGCAAACCTCCTTGCCGATTATTAATTCTTCTG
CCAGCAATGTTTTTTTAATTCAGTCGTGGGTCGCCAATGCCGATGGTTCACGCTCGACGGATTTTATCATTACGCCGCCT
CTCTTTGTGATCCAGCCTAAAAAAGAAAATATATTACGTATTATGTATGTCGGGCCGTCATTACCGACCGATCGCGAAAG
CGTGTTTTATTTAAACAGTAAAGTGATACCCTCTGTCGATAAAAATAAACTGACCGGCAACTCCCTGCAAATTGCGACGC
AAAGCGTGATTAAGCTATTTATCCGCCCGAAAAATCTGGCGGAGGCGCCAGCCCATGCCCCGGCAACGCTTCGCTGCCGT
AACGAGCGCGGCCAGCTAACGATTACTAACCCTTCGCCGTACTACGTTTCGATGGTTGAACTGTACAGCGCGGGGAAAAA
ACTGCCGAATACTATGGTACCGCCGAAAGGCGCGATCACTCTCCCGGCGACGCCTGGCCAGGTATCTTTGCGCACGGTAA
ACGATTTTGGCGCAACGACGCCAGCACGCGTTTGTCCAGCTTCATGA

Protein sequence : 
MKKNVPIFLRLLLLLSAAGLSFAVQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP
LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKVIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPATLRCR
NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 1e-44 50
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 5e-42 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_00115 YP_007924385.1 fimbrial chaperone VFG0445 Protein 2e-48 51
TY21A_00115 YP_007924385.1 fimbrial chaperone VFG0875 Protein 5e-46 51
TY21A_00115 YP_007924385.1 fimbrial chaperone VFG0911 Protein 3e-42 48
TY21A_00115 YP_007924385.1 fimbrial chaperone VFG1644 Protein 3e-42 48
TY21A_00115 YP_007924385.1 fimbrial chaperone VFG0455 Protein 2e-35 42