Gene Information

Name : TY21A_01030 (TY21A_01030)
Accession : YP_007924564.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : iron-hydroxamate transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 230378 - 231175 bp
Length : 798 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGCAGGAAAACCACATTCATTCCGATACCACCTTTGCGCTGCGAAGCGTCGCTTTTCGTGTGCCGGGCCGCACGCTTTT
ACACCCCCTCTCGTTAACGTTTCCCGCAGGTCGAGTCACCGGACTTATCGGCCATAATGGTTCCGGTAAATCCACGCTGT
TAAAAATGCTGGGCCGCCATCAGCTGCCTTCCGAAGGGGATATTCTGCTCGACAATCAGCCGCTGGCGAGCTGGAGCAGC
AAGGCGTTTGCCCGCAAAGTTGCCTATCTGCCTCAACAATTGCCGCAGGCGGAAGGAATGACGGTGCGCGAACTGGTGGC
GATTGGCCGCTATCCGTGGCACGGCGCGTTGGGACGCTTTGGCGTCGCGGACCGGGAAAAAGTAGACGAGGCGATTACGC
TGGTCGGCTTAAAACCGCTGGCGCATCGTCTGGTCGATAGCCTGTCCGGCGGTGAACGCCAGCGCGCGTGGATTGCCATG
CTGGTCGCGCAGGACAGCCGTTGTCTGCTGCTGGATGAGCCGACGTCAGCGCTGGATATCGCCCATCAGGTTGACGTGCT
GGCGCTGGTGCATCGTTTAAGCCAACAGCGCGGGCTGACGGTGGTTGCGGTGCTGCACGATATCAACATGGCGGCCCGCT
ACTGTGATTATTTAGTAGCGCTACGCGGCGGTGAAATGATTGCGCAAGGAACGCCTGCGGAACTGATGCGCAGTGACACG
CTGGAACAGATTTACGGTATCCCGATGGGTATCCTTCCGCATCCGGCGGGCGCCGCGCCTGTGAGTTTTGTGTATTAA

Protein sequence : 
MQENHIHSDTTFALRSVAFRVPGRTLLHPLSLTFPAGRVTGLIGHNGSGKSTLLKMLGRHQLPSEGDILLDNQPLASWSS
KAFARKVAYLPQQLPQAEGMTVRELVAIGRYPWHGALGRFGVADREKVDEAITLVGLKPLAHRLVDSLSGGERQRAWIAM
LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQQRGLTVVAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRSDT
LEQIYGIPMGILPHPAGAAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-44 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-43 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-45 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-38 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-38 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-38 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_01030 YP_007924564.1 iron-hydroxamate transporter ATP-binding subunit BAC0164 Protein 9e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_01030 YP_007924564.1 iron-hydroxamate transporter ATP-binding subunit VFG0925 Protein 2e-44 44
TY21A_01030 YP_007924564.1 iron-hydroxamate transporter ATP-binding subunit VFG1042 Protein 8e-45 43