Gene Information

Name : TY21A_06550 (TY21A_06550)
Accession : YP_007925614.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1354061 - 1354840 bp
Length : 780 bp
Strand : +
Note : COG4791 Type III secretory pathway, component EscT

DNA sequence :
ATGACACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTTTCTTTATTACTTCC
TCTATTAAAAAGTGGCAGTTTAGGGGCCGCGCTTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA
TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT
GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG
CGCGACAATGGGTACGATATTCAATTCTACAATGGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTTTTGT
GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATACCAATATTTACCGCCAGGG
CGTACTTTATTATTTGATCGGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGCATCAGCTT
CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG
TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTAGTTCTACTAACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC
TATTTGGTTGAAAGCGATAAGTTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA

Protein sequence :
MTQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII
GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTMEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG
RTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH
YLVESDKFYIYLKDWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 2e-99 100
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 2e-99 100
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 9e-98 99
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 6e-98 99
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 6e-98 99
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 3e-45 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_06550 YP_007925614.1 putative type III secretion protein VFG0521 Protein 4e-98 99