Gene Information

Name : TY21A_06485 (TY21A_06485)
Accession : YP_007925601.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : type III secretion system protein, SsaH family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1344136 - 1344426 bp
Length : 291 bp
Strand : +
Note : -

DNA sequence : 
GTGGAATCATTGCTAAAATCTGAAGTTATTAGCGACGATGTTCGACGGTTGCTGCTGGAAATCATGTTTGCGGGCGTTAA
CCATAGCCTGATTTCCCAGGTACATGCGATGTTACCAGCGCTAACGGTTATTGTTCCGGATAAAAAATTACAGTTGGTAT
GTTTGGCATTATTGTTGGCGGGTTTAAATGAGCCGTTAAAGGCCGCGAAAATTTTATCGGATATTGATTTGCCAGAGGCT
ATGGCGCTACGAATGTTATTTCCTGCACCAAATGAGGGGTTTGAAAATTGA

Protein sequence : 
MESLLKSEVISDDVRRLLLEIMFAGVNHSLISQVHAMLPALTVIVPDKKLQLVCLALLLAGLNEPLKAAKILSDIDLPEA
MALRMLFPAPNEGFEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaH NP_456121.1 putative pathogenicity island protein Virulence SPI-2 Protein 6e-17 100
ssaH NP_805078.1 pathogenicity island protein Virulence SPI-2 Protein 6e-17 100
ssaH NP_460372.1 type III secretion system apparatus protein Virulence SPI-2 Protein 1e-16 99
ssaH YP_216415.1 secretion system apparatus protein SsaH Virulence SPI-2 Protein 5e-26 99
ssaH CAA12194.1 SsaH Virulence SPI-2 Protein 1e-16 99
ssaH AAX49621.1 SsaH Virulence SPI-2 Protein 1e-16 99
ssaI AAC28875.1 SsaI Virulence SPI-2 Protein 6e-16 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_06485 YP_007925601.1 type III secretion system protein, SsaH family VFG0508 Protein 4e-17 99