Gene Information

Name : TY21A_06475 (TY21A_06475)
Accession : YP_007925599.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : putative pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1343160 - 1343849 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACCTGTTAGCCCAAATGCTCAGGTCGGAGGGCAACGTCCTGTTAACGCGCCTGAGGAATCACCTCCATGTCCCTC
ATTGCCACATCCGGAAACCAATATGGAGAGTGGTAGAATTGGACCTCAACAAGGAAAAGAGCGGTTATTGGCCGGACTTG
CGAAACGAGTGATAGAGTGTTTTCCAAAAGAAATTTTTAGTTGGCAAACGGTCATTTTGGGCGGACAGATTTTATGCTGT
TCCGCTGGAATAGCATTAACAGTGCTAAGTGGTGGAGGCGCACCGCTCGTAGCCCTGGCAGGAATTGGCCTTGCTATTGC
CATCGCGGATGTCGCCTGTCTTATCTACCATCATAAACATCATTTGCCTATGGCTCACGACAGTATAGGCAATGCCGTTT
TTTATATTGCTAATTGTTTCGCCAATCAACGCAAAAGTATGGCGATTGCTAAAGCCGTCTCCCTGGGCGGTAGATTAGCC
TTAACCGCGACGGTAGTGACGCATTCATACTGGAGTGGGAGTTTGGGACTACAGCCTCACTTATTAGAGCATCTTAATGA
TCTTACCTACGGACTAATGAGTTTTACTCGCTTCGGTATGGATGGGATGGCAATGACCGGTATGCAGGTCAGCAGCCCAT
TATATCGTTTGCTGGCTCAGGTGACGCCAGAACAACGTGCGCCGGAGTAA

Protein sequence : 
MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQGKERLLAGLAKRVIECFPKEIFSWQTVILGGQILCC
SAGIALTVLSGGGAPLVALAGIGLAIAIADVACLIYHHKHHLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLA
LTATVVTHSYWSGSLGLQPHLLEHLNDLTYGLMSFTRFGMDGMAMTGMQVSSPLYRLLAQVTPEQRAPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseG NP_456123.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 8e-94 100
sseG NP_805076.1 pathogenicity island effector protein Virulence SPI-2 Protein 8e-94 100
sseG AAC28873.1 SseG Virulence SPI-2 Protein 2e-92 99
sseG CAA12192.1 SseG Virulence SPI-2 Protein 2e-92 99
sseG NP_460370.1 secreted effector protein Virulence SPI-2 Protein 2e-92 99
sseG YP_216413.1 secretion system effector protein SseG Virulence SPI-2 Protein 2e-92 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_06475 YP_007925599.1 putative pathogenicity island effector protein VFG0506 Protein 9e-93 99