Gene Information

Name : TY21A_06465 (TY21A_06465)
Accession : YP_007925597.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : putative pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1341931 - 1342365 bp
Length : 435 bp
Strand : +
Note : COG0457 FOG: TPR repeat

DNA sequence : 
ATGATGATGAAAGAAGATCAGAAAAATAAAATACCCGAAGACATTCTGAAACAGCTATTATCCGTTGATCCGGAAACCGT
TTATGCCAGTGGTTACGCCTCATGGCAGGAGGGGGATTATTCGCGCGCCGTAATCGATTTTAGCTGGCTGGTGATGGCCC
AGCCATGGAGTTGGCGTGCCCATATTGCATTGGCTGGCACCTGGATGATGCTTAAAGAATACACGACGGCCATTAATTTC
TATGGACATGCCTTGATGCTGGATGCCAGCCATCCAGAACCGGTTTACCAAACGGGCGTCTGTCTCAAAATGATGGGGGA
ACCCGGGTTGGCGAGAGAGGCTTTTCAAACCGCAATCAAGATGAGCTATGCGGATGCCTCATGGAGTGAGATTCGCCAGA
ATGCGCAAAAAATGGTTGATACTCTTATTGCTTAA

Protein sequence : 
MMMKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINF
YGHALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQKMVDTLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscB NP_456125.1 putative pathogenicity island protein Virulence SPI-2 Protein 4e-63 100
sscB NP_805074.1 pathogenicity island protein Virulence SPI-2 Protein 4e-63 100
sscB AAC28884.1 SscB Virulence SPI-2 Protein 2e-62 99
sscB CAA12190.1 SscB Virulence SPI-2 Protein 2e-62 99
SC1424 YP_216411.1 secretion system chaperone protein SscB Virulence SPI-2 Protein 2e-62 99
sscB NP_460368.1 secretion system chaperone Virulence SPI-2 Protein 2e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_06465 YP_007925597.1 putative pathogenicity island protein VFG0504 Protein 6e-63 99