Gene Information

Name : TY21A_06460 (TY21A_06460)
Accession : YP_007925596.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : putative pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1341463 - 1341879 bp
Length : 417 bp
Strand : +
Note : COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase)

DNA sequence : 
ATGGTGCAAGAAATAGAGCAATGGTTGCGTCGGCATCAGGTGTTTACTGAGCCTGCATATTTAGGGGAGACCGCCATATT
ACTTGGGCAGCAGTTTATATTATCGCCTTACCTGGTGATCTATCGTATTGAGGCAAAAGAAATGATTATTTGTGAGTTCA
GGCGCCTGACGCCCGGGCAACCTCGACCACAGCAATTGTTTCACTTACTGGGACTTTTACGCGGGATATTTGTGCATCAC
CCGCAGTTAACATGTTTAAAGATGTTGATAATCACCGACGTTCTGGATGAAAAAAAAGCTATGCTACGCAGGAAATTATT
GCGCATCCTGACAGTAATGGGAGCGACCTTTACACAGCTTGATGGCGATAACTGGACAATTTTATCCGCCGAGCATCTTA
TCCAGCGACGTTTTTAA

Protein sequence : 
MVQEIEQWLRRHQVFTEPAYLGETAILLGQQFILSPYLVIYRIEAKEMIICEFRRLTPGQPRPQQLFHLLGLLRGIFVHH
PQLTCLKMLIITDVLDEKKAMLRRKLLRILTVMGATFTQLDGDNWTILSAEHLIQRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseE NP_456126.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 1e-62 100
sseE NP_805073.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-62 100
sseE NP_460367.1 secreted effector protein Virulence SPI-2 Protein 1e-62 99
sseE AAC28883.1 SseE Virulence SPI-2 Protein 7e-63 99
sseE CAA12189.1 SseE Virulence SPI-2 Protein 7e-63 99
sseE YP_216410.1 secretion system effector SseE Virulence SPI-2 Protein 1e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_06460 YP_007925596.1 putative pathogenicity island effector protein VFG0503 Protein 3e-63 99