Gene Information

Name : I872_01355 (I872_01355)
Accession : YP_007922546.1
Strain : Streptococcus oligofermentans AS 1.3089
Genome accession: NC_021175
Putative virulence/resistance : Virulence
Product : ATP-dependent protease, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 278232 - 280343 bp
Length : 2112 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAACAACAATTACAACAATTTTAACAGTATGGATGACCTTTTCAACCAACTCATGGGGCGTATGGGTGGCTACAATAG
CGAACACCGGCGTTACTTGATCAATGGTAGAGAGGTCACACCGGAAGAGTTTGCTCAGTACCGAGCTACTGGAAAGCTCC
CTGGTCAAATGGCTAGCGAACAGGATTTGCAAGCTGGAGCGCATGGGCCTAAGCAAGACGGCATTCTGGCTAAGCTAGGT
CGCAATCTGACCCAAGAAGCGCGTGAAGGCAAGCTGGATCCAGTCATTGGACGCAATAAGGAAATCCAAGAAACAGCGGA
AATCCTTTCCCGCCGGACCAAGAATAATCCAGTTCTGGTCGGAGATGCAGGTGTCGGAAAGACCGCTGTCGTAGAAGGAT
TGGCTCAGGCTATCGTCAATGGTGACGTGCCAGCGGCCATCAAGAACAAAGAAATTATTTCTGTTGATATTTCTGGCTTG
GAAGCTGGTACTCAATATCGTGGTAGCTTTGAAGAAAATATCCAAAACTTGGTCAATGAAGTCAAGGAAGCCGGGAATGT
TATCCTCTTCTTTGACGAAATCCATCAAATTCTGGGTGCAGGATCTACTGGCGGAGACAGTGGTTCTAAGGGACTGGCAG
ATATTCTCAAACCAGCGCTTTCGCGTGGTGAACTGACTGTTATCGGGGCTACTACTCAGGACGAGTACCGCAATACTATT
CTCAAAAATGCAGCTTTAGCTCGTCGTTTCAATGAAGTTAAGGTCAATGCACCGTCTGCTGAGGATACTTATCAGATCCT
TCGAGGTATTCGGGACCTGTATGAAAAGCACCACAATGTCATCCTGCCGGATGAAGTGCTGAAAGCGGCTGTGGATTACT
CTGTTCAGTATATTCCACAACGGAGCCTGCCAGACAAGGCCATTGACCTGGTCGACGTGACTGCTGCCCACCTGGCAGCC
CAGCATCCAGTAACCGATGTCCATGCGGTTGAACATGAGATTGCTGAGCAAAAAGACAAACAGGAAGCAGCTGTTGAGAA
AGAAGATTATGAAGCAGCTCTGAATGCCAAGACCCGCATCGAAGAGCTGGAAAAGAAAATTCAAAACCACACCGAGGATA
TGAAGGTAACGGCGACAGTCAACGATGTAGCTGAGTCTGTTGAGCGGATGACGGGAGTGCCGGTATCTCAGATGGGTGCC
AGCGACATTGAGCGCCTCAAGGGCATGAATGACCGCCTCAAAGCCAAAGTTATTGGCCAAGACAAGGCTGTAGAAGCTGT
GGCTAGAGCCATCCGCCGTAACCGTGCAGGCTTTGACGAAGGTAACCGTCCGATCGGCAGCTTCCTCTTCGTTGGTCCGA
CAGGGGTTGGTAAGACTGAGTTGGCTAAGCAACTGGCTCTGGATATGTTCGGTACCAAGGATGCTATCATCCGTCTGGAC
ATGTCTGAGTACTCTGACCGCACCGCTGTTTCCAAGCTGATTGGTACGACTGCTGGTTATGTCGGCTATGATGACAACAA
CAACACTCTGACCGAGCGCGTGCGCCGCAATCCATACTCTATCATTCTCTTGGATGAGATTGAAAAGGCTGATCCACAAG
TGATTACCCTTCTCCTTCAAGTTCTGGATGATGGACGTTTGACGGATGGTCAAGGGAATACAGTCAACTTCAAGAACACG
GTTATCATTGCAACTTCTAATGCTGGCTTTGGCTATGAAGCAGGCTTGGAAGAGGATGCAGAAAAGCCTGAGCTGATGGA
TCGACTCAAACATTATTTCCGCCCAGAGTTCCTCAATCGTTTCAATGCAGTGATCGAGTTCTCTCATCTCAAGAAAGAAG
ATTTGATGGAAATTGTGAATCTCATGCTGGTTGAAGTAAATCAAACTTTGAGCAAGAAGGAAATTGATCTGGCTGTATCT
GATGCAGCTAAGGAGTTCCTGCGTGATGCTGGTTATGACCAAGTCATGGGTGTTCGTCCACTCCGCCGTGTCATCGAGCA
GCAAATTCGTGACAAGGTGACTGACTTCCACTTGGATAACCTAGATGCTAAGCACCTGACTGCAGATATGGAAGATGGAA
CTTTGGTGATCCGTGCAAAATCAGCAGAATAA

Protein sequence :
MNNNYNNFNSMDDLFNQLMGRMGGYNSEHRRYLINGREVTPEEFAQYRATGKLPGQMASEQDLQAGAHGPKQDGILAKLG
RNLTQEAREGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISVDISGL
EAGTQYRGSFEENIQNLVNEVKEAGNVILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTYQILRGIRDLYEKHHNVILPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTDVHAVEHEIAEQKDKQEAAVEKEDYEAALNAKTRIEELEKKIQNHTEDMKVTATVNDVAESVERMTGVPVSQMGA
SDIERLKGMNDRLKAKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNNNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEAGLEEDAEKPELMDRLKHYFRPEFLNRFNAVIEFSHLKKEDLMEIVNLMLVEVNQTLSKKEIDLAVS
DAAKEFLRDAGYDQVMGVRPLRRVIEQQIRDKVTDFHLDNLDAKHLTADMEDGTLVIRAKSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-140 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I872_01355 YP_007922546.1 ATP-dependent protease, ATP-binding subunit VFG0080 Protein 1e-150 49
I872_01355 YP_007922546.1 ATP-dependent protease, ATP-binding subunit VFG0079 Protein 3e-141 46