|
Name : BTI_4104 (BTI_4104) Accession : YP_007920563.1 Strain : Genome accession: NC_021174 Putative virulence/resistance : Virulence Product : type III secretion, HrcV family protein Function : - COG functional category : - COG ID : - EC number : - Position : 591542 - 593614 bp Length : 2073 bp Strand : - Note : hrcV: type III secretion, HrcV family protein DNA sequence : ATGACGCTGAAAACCCTCAAACTTCCCGCCGGCGGCGAGGTCGGCATCACGGTGCTCGTCGTCGCGATCGTGTCGCTGAT GATCCTGCCGCTGCCGCCAGAGGTGATCGACGTGCTGCTCGGCATCAACATCGCGATCAGCGTCACGCTGCTGATGGTGA CGATGTATGTCGGCAGCATCGTGTCGCTGTCGGTGTTTCCGTCGGTCCTGCTGTTCACGACGCTGTACCGGCTGTCGCTG AACATCGCATCGACGAAATCGATCCTGCTGCACGCGAACGCGGGCGACATCATCGAGAGCTTCGGCGAGCTCGTCGTCGG CGGCAATCTCGTCGTCGGCCTCGTCGTGTTCCTGATCATCACGACCGTGCAGTTCATCGTGATCGCGAAGGGTTCGGAGC GCGTGGCCGAAGTCGGCGCGCGCTTCACGCTCGACGCGATGCCGGGCAAGCAGATGAGCATCGACGCCGACCTGCGCGCG AACATCCTGACGCCCGACGAGGCGCGCCGCAAGCGCGCGACGCTCGCGAAGGAGAGCCAGTTGCACGGCGGGATGGACGG CGCGATGAAATTCGTCAAGGGCGACGCGATCGCGGGGCTCATCATCACGCTCGTGAACATCGTCGCGGGCATCGCGATCG GCGTGATGTACCACGGGATGACGGCGGGGGAAGCCGCGAACCGCTTCTCGATCCTGTCGGTCGGCGACGCGATGGTGTCG CAGATTCCGTCGCTGCTGATCTCGGTCGCGGCGGGCGTGATGATCACGCGCGTCGCCGACGATCACGACGAAGGCGAAGG CACGTCGCTCGGCTCCGAGATCGCGAGGCAACTGGGCGGCAGCCATCGCGCGCTGTATTTCGCGGCGGTGCTGCTGCTCG GCTTCGCCGCGGTGCCGGGCTTTCCGGCGGCGCTCTTCGTGCTGCTGTCGGCGACGCTCGCGTTCGCCGGCTACCGGCTG CAAAAGGGCGCGCGCCGCTCGACCGCGCGCGGCGAGCCGGTGATCGCGCTGCAGCGCGCGGGCGCGAAGAGCGGCACGCC GTCGATCCTGCCGCGCGCGCCGCTCTTCACGTGCGCGATCGGCGTGCGCGTCTCGCCCGATCTCGTCGCGCGGCTCGCGC CCGCCGCGCTCGATCGCGCGTTCGACGAGGAGCGCGCGAAGCTGCAGGAGGAGCAGGGGCTGCCGTTTCCCGGCATCACG CTGTGGACGAGCGGCGCGCTGCCCGCGGCGACGTGCGAGATCCTGATGCGCGACGTGCCGCAGGCGCGGCTCGAATTGCC GGCTGACCAGACGATGCTGCCCGACGCGGCGTCCGATCCCGCGCTCGCCGGCCGCTGCACGAAGCGCGGGCCCGCGGGCG GGCTCGCCGAGAGCTACTGGATCGACGACAAGGCGGCGCCGGCCGGCGCGCGCGCGTGGCGCGCCGAGCAGGTGATCGCG CACGAGACGATCGCGCTGCTCAGGCGCAACGCCTACCTGTTCCTCGGCATTCAGGAAACCCAGTGGATTCTCGACCAGCT CGGCCTCGACTATCCGGGGCTCGTCGCCGAGGTGCAGAAGGCGCTGCCGACGCAGCGCATCGCCGACGTGCTGCGCCGCC TGCTCGAAGAGCACATCCCGATCCGCAACGCGCGCGACATCATGGAGAGCCTCGTCGCGTGGGGGCCGAAGGAGAAGGAC ATGCTGATGCTCGCCGAATACGTGCGCGGCGACCTGTCGCGCTATCTCGCGTATCGCGCGGCGCGCGGCGCGCGGCAATT GCCGGCCGTGCTGCTCGACATGGCGGTCGAGCAGCACATCCGGCAGTCGATCAAGCAGACGCCCGCCGGCAACTTCCTCG CGCTGCCGCCCGAGCAGGTGCGCTATCTGGTCGACAGCGTCGCGTCGTTCGTCGGCGACGCGCCGCGCGACGACGTCGCG CTCGTCACGTCGATGGACGTGCGCCGCTACACGCGGCGGATGATCGAGGCGCGGCTCGGCTGGCTGCCCGTCTATTCGTA CCAGGAGCTCGGCGACCAGGTCGAATTGCGGCCGGTCGGCCGCGTGACGATGCCGACGGCGGCCCACGCATGA Protein sequence : MTLKTLKLPAGGEVGITVLVVAIVSLMILPLPPEVIDVLLGINIAISVTLLMVTMYVGSIVSLSVFPSVLLFTTLYRLSL NIASTKSILLHANAGDIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRA NILTPDEARRKRATLAKESQLHGGMDGAMKFVKGDAIAGLIITLVNIVAGIAIGVMYHGMTAGEAANRFSILSVGDAMVS QIPSLLISVAAGVMITRVADDHDEGEGTSLGSEIARQLGGSHRALYFAAVLLLGFAAVPGFPAALFVLLSATLAFAGYRL QKGARRSTARGEPVIALQRAGAKSGTPSILPRAPLFTCAIGVRVSPDLVARLAPAALDRAFDEERAKLQEEQGLPFPGIT LWTSGALPAATCEILMRDVPQARLELPADQTMLPDAASDPALAGRCTKRGPAGGLAESYWIDDKAAPAGARAWRAEQVIA HETIALLRRNAYLFLGIQETQWILDQLGLDYPGLVAEVQKALPTQRIADVLRRLLEEHIPIRNARDIMESLVAWGPKEKD MLMLAEYVRGDLSRYLAYRAARGARQLPAVLLDMAVEQHIRQSIKQTPAGNFLALPPEQVRYLVDSVASFVGDAPRDDVA LVTSMDVRRYTRRMIEARLGWLPVYSYQELGDQVELRPVGRVTMPTAAHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 1e-155 | 64 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 1e-155 | 64 |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 3e-152 | 63 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 4e-149 | 63 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 6e-149 | 63 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 3e-152 | 63 |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 5e-151 | 62 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 3e-115 | 43 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 9e-92 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BTI_4104 | YP_007920563.1 | type III secretion, HrcV family protein | VFG0064 | Protein | 4e-119 | 44 |
| BTI_4104 | YP_007920563.1 | type III secretion, HrcV family protein | VFG0384 | Protein | 1e-118 | 43 |
| BTI_4104 | YP_007920563.1 | type III secretion, HrcV family protein | VFG0198 | Protein | 1e-106 | 43 |
